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Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity

Dividing a pre-defined brain region into several heterogenous subregions is crucial for understanding its functional segregation and integration. Due to the high dimensionality of brain functional features, clustering is often postponed until dimensionality reduction in traditional parcellation fram...

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Autores principales: Peng, Limin, Hou, Chenping, Su, Jianpo, Shen, Hui, Wang, Lubin, Hu, Dewen, Zeng, Ling-Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10216165/
https://www.ncbi.nlm.nih.gov/pubmed/37239229
http://dx.doi.org/10.3390/brainsci13050757
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author Peng, Limin
Hou, Chenping
Su, Jianpo
Shen, Hui
Wang, Lubin
Hu, Dewen
Zeng, Ling-Li
author_facet Peng, Limin
Hou, Chenping
Su, Jianpo
Shen, Hui
Wang, Lubin
Hu, Dewen
Zeng, Ling-Li
author_sort Peng, Limin
collection PubMed
description Dividing a pre-defined brain region into several heterogenous subregions is crucial for understanding its functional segregation and integration. Due to the high dimensionality of brain functional features, clustering is often postponed until dimensionality reduction in traditional parcellation frameworks occurs. However, under such stepwise parcellation, it is very easy to fall into the dilemma of local optimum since dimensionality reduction could not take into account the requirement of clustering. In this study, we developed a new parcellation framework based on the discriminative embedded clustering (DEC), combining subspace learning and clustering in a common procedure with alternative minimization adopted to approach global optimum. We tested the proposed framework in functional connectivity-based parcellation of the hippocampus. The hippocampus was parcellated into three spatial coherent subregions along the anteroventral–posterodorsal axis; the three subregions exhibited distinct functional connectivity changes in taxi drivers relative to non-driver controls. Moreover, compared with traditional stepwise methods, the proposed DEC-based framework demonstrated higher parcellation consistency across different scans within individuals. The study proposed a new brain parcellation framework with joint dimensionality reduction and clustering; the findings might shed new light on the functional plasticity of hippocampal subregions related to long-term navigation experience.
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spelling pubmed-102161652023-05-27 Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity Peng, Limin Hou, Chenping Su, Jianpo Shen, Hui Wang, Lubin Hu, Dewen Zeng, Ling-Li Brain Sci Article Dividing a pre-defined brain region into several heterogenous subregions is crucial for understanding its functional segregation and integration. Due to the high dimensionality of brain functional features, clustering is often postponed until dimensionality reduction in traditional parcellation frameworks occurs. However, under such stepwise parcellation, it is very easy to fall into the dilemma of local optimum since dimensionality reduction could not take into account the requirement of clustering. In this study, we developed a new parcellation framework based on the discriminative embedded clustering (DEC), combining subspace learning and clustering in a common procedure with alternative minimization adopted to approach global optimum. We tested the proposed framework in functional connectivity-based parcellation of the hippocampus. The hippocampus was parcellated into three spatial coherent subregions along the anteroventral–posterodorsal axis; the three subregions exhibited distinct functional connectivity changes in taxi drivers relative to non-driver controls. Moreover, compared with traditional stepwise methods, the proposed DEC-based framework demonstrated higher parcellation consistency across different scans within individuals. The study proposed a new brain parcellation framework with joint dimensionality reduction and clustering; the findings might shed new light on the functional plasticity of hippocampal subregions related to long-term navigation experience. MDPI 2023-05-03 /pmc/articles/PMC10216165/ /pubmed/37239229 http://dx.doi.org/10.3390/brainsci13050757 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Peng, Limin
Hou, Chenping
Su, Jianpo
Shen, Hui
Wang, Lubin
Hu, Dewen
Zeng, Ling-Li
Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title_full Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title_fullStr Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title_full_unstemmed Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title_short Hippocampus Parcellation via Discriminative Embedded Clustering of fMRI Functional Connectivity
title_sort hippocampus parcellation via discriminative embedded clustering of fmri functional connectivity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10216165/
https://www.ncbi.nlm.nih.gov/pubmed/37239229
http://dx.doi.org/10.3390/brainsci13050757
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