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How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation
Probabilistic stimulation maps of deep brain stimulation (DBS) effect based on voxel-wise statistics (p-maps) have increased in literature over the last decade. These p-maps require correction for Type-1 errors due to multiple testing based on the same data. Some analyses do not reach overall signif...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10216537/ https://www.ncbi.nlm.nih.gov/pubmed/37239228 http://dx.doi.org/10.3390/brainsci13050756 |
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author | Nordin, Teresa Blomstedt, Patric Hemm, Simone Wårdell, Karin |
author_facet | Nordin, Teresa Blomstedt, Patric Hemm, Simone Wårdell, Karin |
author_sort | Nordin, Teresa |
collection | PubMed |
description | Probabilistic stimulation maps of deep brain stimulation (DBS) effect based on voxel-wise statistics (p-maps) have increased in literature over the last decade. These p-maps require correction for Type-1 errors due to multiple testing based on the same data. Some analyses do not reach overall significance, and this study aims to evaluate the impact of sample size on p-map computation. A dataset of 61 essential tremor patients treated with DBS was used for the investigation. Each patient contributed with four stimulation settings, one for each contact. From the dataset, 5 to 61 patients were randomly sampled with replacement for computation of p-maps and extraction of high- and low-improvement volumes. For each sample size, the process was iterated 20 times with new samples generating in total 1140 maps. The overall p-value corrected for multiple comparisons, significance volumes, and dice coefficients (DC) of the volumes within each sample size were evaluated. With less than 30 patients (120 simulations) in the sample, the variation in overall significance was larger and the median significance volumes increased with sample size. Above 120 simulations, the trends stabilize but present some variations in cluster location, with a highest median DC of 0.73 for n = 57. The variation in location was mainly related to the region between the high- and low-improvement clusters. In conclusion, p-maps created with small sample sizes should be evaluated with caution, and above 120 simulations in single-center studies are probably required for stable results. |
format | Online Article Text |
id | pubmed-10216537 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-102165372023-05-27 How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation Nordin, Teresa Blomstedt, Patric Hemm, Simone Wårdell, Karin Brain Sci Article Probabilistic stimulation maps of deep brain stimulation (DBS) effect based on voxel-wise statistics (p-maps) have increased in literature over the last decade. These p-maps require correction for Type-1 errors due to multiple testing based on the same data. Some analyses do not reach overall significance, and this study aims to evaluate the impact of sample size on p-map computation. A dataset of 61 essential tremor patients treated with DBS was used for the investigation. Each patient contributed with four stimulation settings, one for each contact. From the dataset, 5 to 61 patients were randomly sampled with replacement for computation of p-maps and extraction of high- and low-improvement volumes. For each sample size, the process was iterated 20 times with new samples generating in total 1140 maps. The overall p-value corrected for multiple comparisons, significance volumes, and dice coefficients (DC) of the volumes within each sample size were evaluated. With less than 30 patients (120 simulations) in the sample, the variation in overall significance was larger and the median significance volumes increased with sample size. Above 120 simulations, the trends stabilize but present some variations in cluster location, with a highest median DC of 0.73 for n = 57. The variation in location was mainly related to the region between the high- and low-improvement clusters. In conclusion, p-maps created with small sample sizes should be evaluated with caution, and above 120 simulations in single-center studies are probably required for stable results. MDPI 2023-05-03 /pmc/articles/PMC10216537/ /pubmed/37239228 http://dx.doi.org/10.3390/brainsci13050756 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Nordin, Teresa Blomstedt, Patric Hemm, Simone Wårdell, Karin How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title | How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title_full | How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title_fullStr | How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title_full_unstemmed | How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title_short | How Sample Size Impacts Probabilistic Stimulation Maps in Deep Brain Stimulation |
title_sort | how sample size impacts probabilistic stimulation maps in deep brain stimulation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10216537/ https://www.ncbi.nlm.nih.gov/pubmed/37239228 http://dx.doi.org/10.3390/brainsci13050756 |
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