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Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection
The use of medical images for colon cancer detection is considered an important problem. As the performance of data-driven methods relies heavily on the images generated by a medical method, there is a need to inform research organizations about the effective imaging modalities, when coupled with de...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10217759/ https://www.ncbi.nlm.nih.gov/pubmed/37238207 http://dx.doi.org/10.3390/diagnostics13101721 |
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author | Alhazmi, Wael Turki, Turki |
author_facet | Alhazmi, Wael Turki, Turki |
author_sort | Alhazmi, Wael |
collection | PubMed |
description | The use of medical images for colon cancer detection is considered an important problem. As the performance of data-driven methods relies heavily on the images generated by a medical method, there is a need to inform research organizations about the effective imaging modalities, when coupled with deep learning (DL), for detecting colon cancer. Unlike previous studies, this study aims to comprehensively report the performance behavior for detecting colon cancer using various imaging modalities coupled with different DL models in the transfer learning (TL) setting to report the best overall imaging modality and DL model for detecting colon cancer. Therefore, we utilized three imaging modalities, namely computed tomography, colonoscopy, and histology, using five DL architectures, including VGG16, VGG19, ResNet152V2, MobileNetV2, and DenseNet201. Next, we assessed the DL models on the NVIDIA GeForce RTX 3080 Laptop GPU (16GB GDDR6 VRAM) using 5400 processed images divided equally between normal colons and colons with cancer for each of the imaging modalities used. Comparing the imaging modalities when applied to the five DL models presented in this study and twenty-six ensemble DL models, the experimental results show that the colonoscopy imaging modality, when coupled with the DenseNet201 model under the TL setting, outperforms all the other models by generating the highest average performance result of 99.1% (99.1%, 99.8%, and 99.1%) based on the accuracy results (AUC, precision, and F1, respectively). |
format | Online Article Text |
id | pubmed-10217759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-102177592023-05-27 Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection Alhazmi, Wael Turki, Turki Diagnostics (Basel) Article The use of medical images for colon cancer detection is considered an important problem. As the performance of data-driven methods relies heavily on the images generated by a medical method, there is a need to inform research organizations about the effective imaging modalities, when coupled with deep learning (DL), for detecting colon cancer. Unlike previous studies, this study aims to comprehensively report the performance behavior for detecting colon cancer using various imaging modalities coupled with different DL models in the transfer learning (TL) setting to report the best overall imaging modality and DL model for detecting colon cancer. Therefore, we utilized three imaging modalities, namely computed tomography, colonoscopy, and histology, using five DL architectures, including VGG16, VGG19, ResNet152V2, MobileNetV2, and DenseNet201. Next, we assessed the DL models on the NVIDIA GeForce RTX 3080 Laptop GPU (16GB GDDR6 VRAM) using 5400 processed images divided equally between normal colons and colons with cancer for each of the imaging modalities used. Comparing the imaging modalities when applied to the five DL models presented in this study and twenty-six ensemble DL models, the experimental results show that the colonoscopy imaging modality, when coupled with the DenseNet201 model under the TL setting, outperforms all the other models by generating the highest average performance result of 99.1% (99.1%, 99.8%, and 99.1%) based on the accuracy results (AUC, precision, and F1, respectively). MDPI 2023-05-12 /pmc/articles/PMC10217759/ /pubmed/37238207 http://dx.doi.org/10.3390/diagnostics13101721 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Alhazmi, Wael Turki, Turki Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title | Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title_full | Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title_fullStr | Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title_full_unstemmed | Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title_short | Applying Deep Transfer Learning to Assess the Impact of Imaging Modalities on Colon Cancer Detection |
title_sort | applying deep transfer learning to assess the impact of imaging modalities on colon cancer detection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10217759/ https://www.ncbi.nlm.nih.gov/pubmed/37238207 http://dx.doi.org/10.3390/diagnostics13101721 |
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