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Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis
Several factors may increase the risk of development of ovarian cancer. In this study, we investigated the relationship between social, genetic, and histopathologic factors in women with ovarian serous cystadenocarcinoma and titin (TTN) mutations, whether the TTN gene mutation may be a predictor, an...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10218003/ https://www.ncbi.nlm.nih.gov/pubmed/37239452 http://dx.doi.org/10.3390/genes14051092 |
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author | Gomes, Fabiana de Campos Figueiredo, Eric Renato Lima Araújo, Ediane Nunes De Andrade, Edila Monteiro De Carneiro, Carlos Diego Lisbôa Almeida, Gabriel Mácola De Dias, Helana Augusta Andrade Leal Teixeira, Lucélia Inoue Bispo Almeida, Manuela Trindade Farias, Mariusa Fernandes De Linhares, Natália Albim Fonseca, Natasha Lima Da Pereira, Yago Dos Santos de Melo-Neto, João Simão |
author_facet | Gomes, Fabiana de Campos Figueiredo, Eric Renato Lima Araújo, Ediane Nunes De Andrade, Edila Monteiro De Carneiro, Carlos Diego Lisbôa Almeida, Gabriel Mácola De Dias, Helana Augusta Andrade Leal Teixeira, Lucélia Inoue Bispo Almeida, Manuela Trindade Farias, Mariusa Fernandes De Linhares, Natália Albim Fonseca, Natasha Lima Da Pereira, Yago Dos Santos de Melo-Neto, João Simão |
author_sort | Gomes, Fabiana de Campos |
collection | PubMed |
description | Several factors may increase the risk of development of ovarian cancer. In this study, we investigated the relationship between social, genetic, and histopathologic factors in women with ovarian serous cystadenocarcinoma and titin (TTN) mutations, whether the TTN gene mutation may be a predictor, and its impact on mortality and survival in these patients. A total of 585 samples from patients with ovarian serous cystadenocarcinoma were collected from The Cancer Genome Atlas and PanCancer Atlas through the cBioPortal for analysis of social, genetic, and histopathological factors. Logistic regression was used to investigate whether TTN mutation could be a predictor, and the Kaplan–Meier method was applied to analyze survival time. TTN mutation frequency did not differ between age at diagnosis, tumor stage, and race, and was related to increased Buffa hypoxia score (p = 0.004), mutation count (p < 0.0001), Winter hypoxia Score (p = 0.030), nonsynonymous tumor mutation burden (TMB) (p < 0.0001), and reduced microsatellite instability sensor score (p = 0.010). The number of mutations (p < 0.0001) and winter hypoxia score (p = 0.008) were positively associated with TTN mutations, and nonsynonymous TMB (p < 0.0001) proved to be a predictor. Mutated TTN affects the score of genetic variables involved in cancer cell metabolism in ovarian cystadenocarcinoma. |
format | Online Article Text |
id | pubmed-10218003 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-102180032023-05-27 Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis Gomes, Fabiana de Campos Figueiredo, Eric Renato Lima Araújo, Ediane Nunes De Andrade, Edila Monteiro De Carneiro, Carlos Diego Lisbôa Almeida, Gabriel Mácola De Dias, Helana Augusta Andrade Leal Teixeira, Lucélia Inoue Bispo Almeida, Manuela Trindade Farias, Mariusa Fernandes De Linhares, Natália Albim Fonseca, Natasha Lima Da Pereira, Yago Dos Santos de Melo-Neto, João Simão Genes (Basel) Article Several factors may increase the risk of development of ovarian cancer. In this study, we investigated the relationship between social, genetic, and histopathologic factors in women with ovarian serous cystadenocarcinoma and titin (TTN) mutations, whether the TTN gene mutation may be a predictor, and its impact on mortality and survival in these patients. A total of 585 samples from patients with ovarian serous cystadenocarcinoma were collected from The Cancer Genome Atlas and PanCancer Atlas through the cBioPortal for analysis of social, genetic, and histopathological factors. Logistic regression was used to investigate whether TTN mutation could be a predictor, and the Kaplan–Meier method was applied to analyze survival time. TTN mutation frequency did not differ between age at diagnosis, tumor stage, and race, and was related to increased Buffa hypoxia score (p = 0.004), mutation count (p < 0.0001), Winter hypoxia Score (p = 0.030), nonsynonymous tumor mutation burden (TMB) (p < 0.0001), and reduced microsatellite instability sensor score (p = 0.010). The number of mutations (p < 0.0001) and winter hypoxia score (p = 0.008) were positively associated with TTN mutations, and nonsynonymous TMB (p < 0.0001) proved to be a predictor. Mutated TTN affects the score of genetic variables involved in cancer cell metabolism in ovarian cystadenocarcinoma. MDPI 2023-05-16 /pmc/articles/PMC10218003/ /pubmed/37239452 http://dx.doi.org/10.3390/genes14051092 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gomes, Fabiana de Campos Figueiredo, Eric Renato Lima Araújo, Ediane Nunes De Andrade, Edila Monteiro De Carneiro, Carlos Diego Lisbôa Almeida, Gabriel Mácola De Dias, Helana Augusta Andrade Leal Teixeira, Lucélia Inoue Bispo Almeida, Manuela Trindade Farias, Mariusa Fernandes De Linhares, Natália Albim Fonseca, Natasha Lima Da Pereira, Yago Dos Santos de Melo-Neto, João Simão Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title | Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title_full | Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title_fullStr | Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title_full_unstemmed | Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title_short | Social, Genetics and Histopathological Factors Related to Titin (TTN) Gene Mutation and Survival in Women with Ovarian Serous Cystadenocarcinoma: Bioinformatics Analysis |
title_sort | social, genetics and histopathological factors related to titin (ttn) gene mutation and survival in women with ovarian serous cystadenocarcinoma: bioinformatics analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10218003/ https://www.ncbi.nlm.nih.gov/pubmed/37239452 http://dx.doi.org/10.3390/genes14051092 |
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