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Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery

DNA barcoding is a powerful method for the identification of lichenized fungi groups for which the diversity is already well-represented in nucleotide databases, and an accurate, robust taxonomy has been established. However, the effectiveness of DNA barcoding for identification is expected to be li...

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Autores principales: La Torre, Renato Daniel, Ramos, Daniel, Mejía, Mayra Doris, Neyra, Edgar, Loarte, Edwin, Orjeda, Gisella
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10219471/
https://www.ncbi.nlm.nih.gov/pubmed/37233263
http://dx.doi.org/10.3390/jof9050552
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author La Torre, Renato Daniel
Ramos, Daniel
Mejía, Mayra Doris
Neyra, Edgar
Loarte, Edwin
Orjeda, Gisella
author_facet La Torre, Renato Daniel
Ramos, Daniel
Mejía, Mayra Doris
Neyra, Edgar
Loarte, Edwin
Orjeda, Gisella
author_sort La Torre, Renato Daniel
collection PubMed
description DNA barcoding is a powerful method for the identification of lichenized fungi groups for which the diversity is already well-represented in nucleotide databases, and an accurate, robust taxonomy has been established. However, the effectiveness of DNA barcoding for identification is expected to be limited for understudied taxa or regions. One such region is Antarctica, where, despite the importance of lichens and lichenized fungi identification, their genetic diversity is far from characterized. The aim of this exploratory study was to survey the lichenized fungi diversity of King George Island using a fungal barcode marker as an initial identification tool. Samples were collected unrestricted to specific taxa in coastal areas near Admiralty Bay. Most samples were identified using the barcode marker and verified up to the species or genus level with a high degree of similarity. A posterior morphological evaluation focused on samples with novel barcodes allowed for the identification of unknown Austrolecia, Buellia, and Lecidea s.l. species. These results contribute to better represent the lichenized fungi diversity in understudied regions such as Antarctica by increasing the richness of the nucleotide databases. Furthermore, the approach used in this study is valuable for exploratory surveys in understudied regions to guide taxonomic efforts towards species recognition and discovery.
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spelling pubmed-102194712023-05-27 Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery La Torre, Renato Daniel Ramos, Daniel Mejía, Mayra Doris Neyra, Edgar Loarte, Edwin Orjeda, Gisella J Fungi (Basel) Article DNA barcoding is a powerful method for the identification of lichenized fungi groups for which the diversity is already well-represented in nucleotide databases, and an accurate, robust taxonomy has been established. However, the effectiveness of DNA barcoding for identification is expected to be limited for understudied taxa or regions. One such region is Antarctica, where, despite the importance of lichens and lichenized fungi identification, their genetic diversity is far from characterized. The aim of this exploratory study was to survey the lichenized fungi diversity of King George Island using a fungal barcode marker as an initial identification tool. Samples were collected unrestricted to specific taxa in coastal areas near Admiralty Bay. Most samples were identified using the barcode marker and verified up to the species or genus level with a high degree of similarity. A posterior morphological evaluation focused on samples with novel barcodes allowed for the identification of unknown Austrolecia, Buellia, and Lecidea s.l. species. These results contribute to better represent the lichenized fungi diversity in understudied regions such as Antarctica by increasing the richness of the nucleotide databases. Furthermore, the approach used in this study is valuable for exploratory surveys in understudied regions to guide taxonomic efforts towards species recognition and discovery. MDPI 2023-05-11 /pmc/articles/PMC10219471/ /pubmed/37233263 http://dx.doi.org/10.3390/jof9050552 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
La Torre, Renato Daniel
Ramos, Daniel
Mejía, Mayra Doris
Neyra, Edgar
Loarte, Edwin
Orjeda, Gisella
Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title_full Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title_fullStr Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title_full_unstemmed Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title_short Survey of Lichenized Fungi DNA Barcodes on King George Island (Antarctica): An Aid to Species Discovery
title_sort survey of lichenized fungi dna barcodes on king george island (antarctica): an aid to species discovery
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10219471/
https://www.ncbi.nlm.nih.gov/pubmed/37233263
http://dx.doi.org/10.3390/jof9050552
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