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Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds
In this article, we have synthesized two contemporary ortho-vanillin-based Salen-type ligands (H(2)L(1)/H(2)L(2)) characterized by modern spectroscopic tools. EDX analysis supports the elemental composition (C, N, O, and Br). SEM examined the morphology of the synthesized compounds. The molecular ge...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10220319/ https://www.ncbi.nlm.nih.gov/pubmed/37251479 http://dx.doi.org/10.1016/j.heliyon.2023.e16057 |
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author | Majumdar, Dhrubajyoti Dubey, Amit Tufail, Aisha Sutradhar, Dipankar Roy, Sourav |
author_facet | Majumdar, Dhrubajyoti Dubey, Amit Tufail, Aisha Sutradhar, Dipankar Roy, Sourav |
author_sort | Majumdar, Dhrubajyoti |
collection | PubMed |
description | In this article, we have synthesized two contemporary ortho-vanillin-based Salen-type ligands (H(2)L(1)/H(2)L(2)) characterized by modern spectroscopic tools. EDX analysis supports the elemental composition (C, N, O, and Br). SEM examined the morphology of the synthesized compounds. The molecular geometry was optimized in the gas phase using B3LYP-D3/6-311G (d, p) level. The global reactivity parameters, HOMO-LUMO energy gap (Δ), atomic properties, MESP, and ADME/T, vividly explore the chemical reactivity and toxicity of two Salen-type ligands. The DFT simulated IR/NMR characterized essential structural assignments, and UV-Visible spectra were employed to predict the optical properties. The article demonstrated in silico molecular docking against the Gm + ve Bacillus subtilis (6UF6), and Gm -ve Proteus Vulgaris establishes the ligand binding ability with essential amino acids through conventional H-bonding or other significant interactions. The docking simulation is compared for two compounds better than the control drugs and confirms the antimicrobial activity. The theoretical drug-like properties have been explored in-depth by ADME/T using the SWISSADME database. The analysis estimated the molecule's lipophilicity, the consensus P0/W, and water solubility. Thus, using various pharmaco-logical parameters, toxicity explains where the electron-withdrawing Br group plays a more toxic effect in H(2)L(2) than in H(2)L(1). |
format | Online Article Text |
id | pubmed-10220319 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-102203192023-05-28 Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds Majumdar, Dhrubajyoti Dubey, Amit Tufail, Aisha Sutradhar, Dipankar Roy, Sourav Heliyon Research Article In this article, we have synthesized two contemporary ortho-vanillin-based Salen-type ligands (H(2)L(1)/H(2)L(2)) characterized by modern spectroscopic tools. EDX analysis supports the elemental composition (C, N, O, and Br). SEM examined the morphology of the synthesized compounds. The molecular geometry was optimized in the gas phase using B3LYP-D3/6-311G (d, p) level. The global reactivity parameters, HOMO-LUMO energy gap (Δ), atomic properties, MESP, and ADME/T, vividly explore the chemical reactivity and toxicity of two Salen-type ligands. The DFT simulated IR/NMR characterized essential structural assignments, and UV-Visible spectra were employed to predict the optical properties. The article demonstrated in silico molecular docking against the Gm + ve Bacillus subtilis (6UF6), and Gm -ve Proteus Vulgaris establishes the ligand binding ability with essential amino acids through conventional H-bonding or other significant interactions. The docking simulation is compared for two compounds better than the control drugs and confirms the antimicrobial activity. The theoretical drug-like properties have been explored in-depth by ADME/T using the SWISSADME database. The analysis estimated the molecule's lipophilicity, the consensus P0/W, and water solubility. Thus, using various pharmaco-logical parameters, toxicity explains where the electron-withdrawing Br group plays a more toxic effect in H(2)L(2) than in H(2)L(1). Elsevier 2023-05-10 /pmc/articles/PMC10220319/ /pubmed/37251479 http://dx.doi.org/10.1016/j.heliyon.2023.e16057 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Majumdar, Dhrubajyoti Dubey, Amit Tufail, Aisha Sutradhar, Dipankar Roy, Sourav Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title | Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title_full | Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title_fullStr | Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title_full_unstemmed | Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title_short | Synthesis, spectroscopic investigation, molecular docking, ADME/T toxicity predictions, and DFT study of two trendy ortho vanillin-based scaffolds |
title_sort | synthesis, spectroscopic investigation, molecular docking, adme/t toxicity predictions, and dft study of two trendy ortho vanillin-based scaffolds |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10220319/ https://www.ncbi.nlm.nih.gov/pubmed/37251479 http://dx.doi.org/10.1016/j.heliyon.2023.e16057 |
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