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Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration
Mass spectrometry imaging (MSI) has been a key driver of groundbreaking discoveries in a number of fields since its inception more than 50 years ago. Recently, MSI development trends have shifted towards ambient MSI (AMSI) as the removal of sample-preparation steps and the possibility of analysing b...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10222327/ https://www.ncbi.nlm.nih.gov/pubmed/37233710 http://dx.doi.org/10.3390/metabo13050669 |
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author | Xiang, Yuchen Metodiev, Martin Wang, Meiqi Cao, Boxuan Bunch, Josephine Takats, Zoltan |
author_facet | Xiang, Yuchen Metodiev, Martin Wang, Meiqi Cao, Boxuan Bunch, Josephine Takats, Zoltan |
author_sort | Xiang, Yuchen |
collection | PubMed |
description | Mass spectrometry imaging (MSI) has been a key driver of groundbreaking discoveries in a number of fields since its inception more than 50 years ago. Recently, MSI development trends have shifted towards ambient MSI (AMSI) as the removal of sample-preparation steps and the possibility of analysing biological specimens in their natural state have drawn the attention of multiple groups across the world. Nevertheless, the lack of spatial resolution has been cited as one of the main limitations of AMSI. While significant research effort has presented hardware solutions for improving the resolution, software solutions are often overlooked, although they can usually be applied in a cost-effective manner after image acquisition. In this vein, we present two computational methods that we have developed to directly enhance the image resolution post-acquisition. Robust and quantitative resolution improvement is demonstrated for 12 cases of openly accessible datasets across laboratories around the globe. Using the same universally applicable Fourier imaging model, we discuss the possibility of true super-resolution by software for future studies. |
format | Online Article Text |
id | pubmed-10222327 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-102223272023-05-28 Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration Xiang, Yuchen Metodiev, Martin Wang, Meiqi Cao, Boxuan Bunch, Josephine Takats, Zoltan Metabolites Article Mass spectrometry imaging (MSI) has been a key driver of groundbreaking discoveries in a number of fields since its inception more than 50 years ago. Recently, MSI development trends have shifted towards ambient MSI (AMSI) as the removal of sample-preparation steps and the possibility of analysing biological specimens in their natural state have drawn the attention of multiple groups across the world. Nevertheless, the lack of spatial resolution has been cited as one of the main limitations of AMSI. While significant research effort has presented hardware solutions for improving the resolution, software solutions are often overlooked, although they can usually be applied in a cost-effective manner after image acquisition. In this vein, we present two computational methods that we have developed to directly enhance the image resolution post-acquisition. Robust and quantitative resolution improvement is demonstrated for 12 cases of openly accessible datasets across laboratories around the globe. Using the same universally applicable Fourier imaging model, we discuss the possibility of true super-resolution by software for future studies. MDPI 2023-05-19 /pmc/articles/PMC10222327/ /pubmed/37233710 http://dx.doi.org/10.3390/metabo13050669 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xiang, Yuchen Metodiev, Martin Wang, Meiqi Cao, Boxuan Bunch, Josephine Takats, Zoltan Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title | Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title_full | Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title_fullStr | Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title_full_unstemmed | Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title_short | Enhancement of Ambient Mass Spectrometry Imaging Data by Image Restoration |
title_sort | enhancement of ambient mass spectrometry imaging data by image restoration |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10222327/ https://www.ncbi.nlm.nih.gov/pubmed/37233710 http://dx.doi.org/10.3390/metabo13050669 |
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