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Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites
To counter the rising threat of bacterial infections in the post-antibiotic age, intensive efforts are invested in engineering new materials with antibacterial properties. The key bottleneck in this initiative is the speed of evaluation of the antibacterial potential of new materials. To overcome th...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10223812/ https://www.ncbi.nlm.nih.gov/pubmed/37242022 http://dx.doi.org/10.3390/nano13101605 |
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author | Rahimi, Shadi Lovmar, Teo Aulova, Alexandra Pandit, Santosh Lovmar, Martin Forsberg, Sven Svensson, Magnus Kádár, Roland Mijakovic, Ivan |
author_facet | Rahimi, Shadi Lovmar, Teo Aulova, Alexandra Pandit, Santosh Lovmar, Martin Forsberg, Sven Svensson, Magnus Kádár, Roland Mijakovic, Ivan |
author_sort | Rahimi, Shadi |
collection | PubMed |
description | To counter the rising threat of bacterial infections in the post-antibiotic age, intensive efforts are invested in engineering new materials with antibacterial properties. The key bottleneck in this initiative is the speed of evaluation of the antibacterial potential of new materials. To overcome this, we developed an automated pipeline for the prediction of antibacterial potential based on scanning electron microscopy images of engineered surfaces. We developed polymer composites containing graphite-oriented nanoplatelets (GNPs). The key property that the algorithm needs to consider is the density of sharp exposed edges of GNPs that kill bacteria on contact. The surface area of these sharp exposed edges of GNPs, accessible to bacteria, needs to be inferior to the diameter of a typical bacterial cell. To test this assumption, we prepared several composites with variable distribution of exposed edges of GNP. For each of them, the percentage of bacterial exclusion area was predicted by our algorithm and validated experimentally by measuring the loss of viability of the opportunistic pathogen Staphylococcus epidermidis. We observed a remarkable linear correlation between predicted bacterial exclusion area and measured loss of viability (R(2) = 0.95). The algorithm parameters we used are not generally applicable to any antibacterial surface. For each surface, key mechanistic parameters must be defined for successful prediction. |
format | Online Article Text |
id | pubmed-10223812 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-102238122023-05-28 Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites Rahimi, Shadi Lovmar, Teo Aulova, Alexandra Pandit, Santosh Lovmar, Martin Forsberg, Sven Svensson, Magnus Kádár, Roland Mijakovic, Ivan Nanomaterials (Basel) Article To counter the rising threat of bacterial infections in the post-antibiotic age, intensive efforts are invested in engineering new materials with antibacterial properties. The key bottleneck in this initiative is the speed of evaluation of the antibacterial potential of new materials. To overcome this, we developed an automated pipeline for the prediction of antibacterial potential based on scanning electron microscopy images of engineered surfaces. We developed polymer composites containing graphite-oriented nanoplatelets (GNPs). The key property that the algorithm needs to consider is the density of sharp exposed edges of GNPs that kill bacteria on contact. The surface area of these sharp exposed edges of GNPs, accessible to bacteria, needs to be inferior to the diameter of a typical bacterial cell. To test this assumption, we prepared several composites with variable distribution of exposed edges of GNP. For each of them, the percentage of bacterial exclusion area was predicted by our algorithm and validated experimentally by measuring the loss of viability of the opportunistic pathogen Staphylococcus epidermidis. We observed a remarkable linear correlation between predicted bacterial exclusion area and measured loss of viability (R(2) = 0.95). The algorithm parameters we used are not generally applicable to any antibacterial surface. For each surface, key mechanistic parameters must be defined for successful prediction. MDPI 2023-05-10 /pmc/articles/PMC10223812/ /pubmed/37242022 http://dx.doi.org/10.3390/nano13101605 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Rahimi, Shadi Lovmar, Teo Aulova, Alexandra Pandit, Santosh Lovmar, Martin Forsberg, Sven Svensson, Magnus Kádár, Roland Mijakovic, Ivan Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title | Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title_full | Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title_fullStr | Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title_full_unstemmed | Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title_short | Automated Prediction of Bacterial Exclusion Areas on SEM Images of Graphene–Polymer Composites |
title_sort | automated prediction of bacterial exclusion areas on sem images of graphene–polymer composites |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10223812/ https://www.ncbi.nlm.nih.gov/pubmed/37242022 http://dx.doi.org/10.3390/nano13101605 |
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