minSNPs: an R package for the derivation of resolution-optimised SNP sets from microbial genomic data

Here, we present the R package, minSNPs. This is a re-development of a previously described Java application named Minimum SNPs. MinSNPs assembles resolution-optimised sets of single nucleotide polymorphisms (SNPs) from sequence alignments such as genome-wide orthologous SNP matrices. MinSNPs can de...

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Detalles Bibliográficos
Autores principales: Hoon, Kian Soon, Holt, Deborah C., Auburn, Sarah, Shaw, Peter, Giffard, Philip M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10224671/
https://www.ncbi.nlm.nih.gov/pubmed/37250706
http://dx.doi.org/10.7717/peerj.15339

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10224671/
https://www.ncbi.nlm.nih.gov/pubmed/37250706
http://dx.doi.org/10.7717/peerj.15339

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