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Diagnosis of COVID-19 from blood parameters using convolutional neural network

Asymptomatically presenting COVID-19 complicates the detection of infected individuals. Additionally, the virus changes too many genomic variants, which increases the virus’s ability to spread. Because there isn’t a specific treatment for COVID-19 in a short time, the essential goal is to reduce the...

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Detalles Bibliográficos
Autores principales: Erol Doğan, Gizemnur, Uzbaş, Betül
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10225057/
https://www.ncbi.nlm.nih.gov/pubmed/37362276
http://dx.doi.org/10.1007/s00500-023-08508-y
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author Erol Doğan, Gizemnur
Uzbaş, Betül
author_facet Erol Doğan, Gizemnur
Uzbaş, Betül
author_sort Erol Doğan, Gizemnur
collection PubMed
description Asymptomatically presenting COVID-19 complicates the detection of infected individuals. Additionally, the virus changes too many genomic variants, which increases the virus’s ability to spread. Because there isn’t a specific treatment for COVID-19 in a short time, the essential goal is to reduce the virulence of the disease. Blood parameters, which contain essential clinical information about infectious diseases and are easy to access, have an important place in COVID-19 detection. The convolutional neural network (CNN) architecture, which is popular in image processing, produces highly successful results for COVID-19 detection models. When the literature is examined, it is seen that COVID-19 studies with CNN are generally done using lung images. In this study, one-dimensional (1D) blood parameters data were converted into two-dimensional (2D) image data after preprocessing, and COVID-19 detection was made with CNN. The t-distributed stochastic neighbor embedding method was applied to transfer the feature vectors to the 2D plane. All data were framed with convex hull and minimum bounding rectangle algorithms to obtain image data. The image data obtained by pixel mapping was presented to the developed 3-line CNN architecture. This study proposes an effective and successful model by providing a combination of low-cost and rapidly-accessible blood parameters and CNN architecture making image data processing highly successful for COVID-19 detection. Ultimately, COVID-19 detection was made with a success rate of 94.85%. This study has brought a new perspective to COVID-19 detection studies by obtaining 2D image data from 1D COVID-19 blood parameters and using CNN.
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spelling pubmed-102250572023-05-30 Diagnosis of COVID-19 from blood parameters using convolutional neural network Erol Doğan, Gizemnur Uzbaş, Betül Soft comput Data Analytics and Machine Learning Asymptomatically presenting COVID-19 complicates the detection of infected individuals. Additionally, the virus changes too many genomic variants, which increases the virus’s ability to spread. Because there isn’t a specific treatment for COVID-19 in a short time, the essential goal is to reduce the virulence of the disease. Blood parameters, which contain essential clinical information about infectious diseases and are easy to access, have an important place in COVID-19 detection. The convolutional neural network (CNN) architecture, which is popular in image processing, produces highly successful results for COVID-19 detection models. When the literature is examined, it is seen that COVID-19 studies with CNN are generally done using lung images. In this study, one-dimensional (1D) blood parameters data were converted into two-dimensional (2D) image data after preprocessing, and COVID-19 detection was made with CNN. The t-distributed stochastic neighbor embedding method was applied to transfer the feature vectors to the 2D plane. All data were framed with convex hull and minimum bounding rectangle algorithms to obtain image data. The image data obtained by pixel mapping was presented to the developed 3-line CNN architecture. This study proposes an effective and successful model by providing a combination of low-cost and rapidly-accessible blood parameters and CNN architecture making image data processing highly successful for COVID-19 detection. Ultimately, COVID-19 detection was made with a success rate of 94.85%. This study has brought a new perspective to COVID-19 detection studies by obtaining 2D image data from 1D COVID-19 blood parameters and using CNN. Springer Berlin Heidelberg 2023-05-28 /pmc/articles/PMC10225057/ /pubmed/37362276 http://dx.doi.org/10.1007/s00500-023-08508-y Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Data Analytics and Machine Learning
Erol Doğan, Gizemnur
Uzbaş, Betül
Diagnosis of COVID-19 from blood parameters using convolutional neural network
title Diagnosis of COVID-19 from blood parameters using convolutional neural network
title_full Diagnosis of COVID-19 from blood parameters using convolutional neural network
title_fullStr Diagnosis of COVID-19 from blood parameters using convolutional neural network
title_full_unstemmed Diagnosis of COVID-19 from blood parameters using convolutional neural network
title_short Diagnosis of COVID-19 from blood parameters using convolutional neural network
title_sort diagnosis of covid-19 from blood parameters using convolutional neural network
topic Data Analytics and Machine Learning
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10225057/
https://www.ncbi.nlm.nih.gov/pubmed/37362276
http://dx.doi.org/10.1007/s00500-023-08508-y
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