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Automated screening of computed tomography using weakly supervised anomaly detection
BACKGROUND: Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, b...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10226438/ https://www.ncbi.nlm.nih.gov/pubmed/37247113 http://dx.doi.org/10.1007/s11548-023-02965-4 |
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author | Hibi, Atsuhiro Cusimano, Michael D. Bilbily, Alexander Krishnan, Rahul G. Tyrrell, Pascal N. |
author_facet | Hibi, Atsuhiro Cusimano, Michael D. Bilbily, Alexander Krishnan, Rahul G. Tyrrell, Pascal N. |
author_sort | Hibi, Atsuhiro |
collection | PubMed |
description | BACKGROUND: Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload. METHODS: Based on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95). RESULTS: Anomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method. CONCLUSION: This study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-023-02965-4. |
format | Online Article Text |
id | pubmed-10226438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-102264382023-05-30 Automated screening of computed tomography using weakly supervised anomaly detection Hibi, Atsuhiro Cusimano, Michael D. Bilbily, Alexander Krishnan, Rahul G. Tyrrell, Pascal N. Int J Comput Assist Radiol Surg Original Article BACKGROUND: Current artificial intelligence studies for supporting CT screening tasks depend on either supervised learning or detecting anomalies. However, the former involves a heavy annotation workload owing to requiring many slice-wise annotations (ground truth labels); the latter is promising, but while it reduces the annotation workload, it often suffers from lower performance. This study presents a novel weakly supervised anomaly detection (WSAD) algorithm trained based on scan-wise normal and anomalous annotations to provide better performance than conventional methods while reducing annotation workload. METHODS: Based on surveillance video anomaly detection methodology, feature vectors representing each CT slice were trained on an AR-Net-based convolutional network using a dynamic multiple-instance learning loss and a center loss function. The following two publicly available CT datasets were retrospectively analyzed: the RSNA brain hemorrhage dataset (normal scans: 12,862; scans with intracranial hematoma: 8882) and COVID-CT set (normal scans: 282; scans with COVID-19: 95). RESULTS: Anomaly scores of each slice were successfully predicted despite inaccessibility to any slice-wise annotations. Slice-level area under the curve (AUC), sensitivity, specificity, and accuracy from the brain CT dataset were 0.89, 0.85, 0.78, and 0.79, respectively. The proposed method reduced the number of annotations in the brain dataset by 97.1% compared to an ordinary slice-level supervised learning method. CONCLUSION: This study demonstrated a significant annotation reduction in identifying anomalous CT slices compared to a supervised learning approach. The effectiveness of the proposed WSAD algorithm was verified through higher AUC than existing anomaly detection techniques. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-023-02965-4. Springer International Publishing 2023-05-29 /pmc/articles/PMC10226438/ /pubmed/37247113 http://dx.doi.org/10.1007/s11548-023-02965-4 Text en © CARS 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Hibi, Atsuhiro Cusimano, Michael D. Bilbily, Alexander Krishnan, Rahul G. Tyrrell, Pascal N. Automated screening of computed tomography using weakly supervised anomaly detection |
title | Automated screening of computed tomography using weakly supervised anomaly detection |
title_full | Automated screening of computed tomography using weakly supervised anomaly detection |
title_fullStr | Automated screening of computed tomography using weakly supervised anomaly detection |
title_full_unstemmed | Automated screening of computed tomography using weakly supervised anomaly detection |
title_short | Automated screening of computed tomography using weakly supervised anomaly detection |
title_sort | automated screening of computed tomography using weakly supervised anomaly detection |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10226438/ https://www.ncbi.nlm.nih.gov/pubmed/37247113 http://dx.doi.org/10.1007/s11548-023-02965-4 |
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