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Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer
OBJECTIVE: To establish machine learning (ML) prediction models for prostate cancer (PCa) using transrectal ultrasound videos and multi-parametric magnetic resonance imaging (mpMRI) and compare their diagnostic performance. MATERIALS AND METHODS: We systematically collated the data of 383 patients,...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10227569/ https://www.ncbi.nlm.nih.gov/pubmed/37260984 http://dx.doi.org/10.3389/fonc.2023.1157949 |
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author | Qi, Xiaoyang Wang, Kai Feng, Bojian Sun, Xingbo Yang, Jie Hu, Zhengbiao Zhang, Maoliang Lv, Cheng Jin, Liyuan Zhou, Lingyan Wang, Zhengping Yao, Jincao |
author_facet | Qi, Xiaoyang Wang, Kai Feng, Bojian Sun, Xingbo Yang, Jie Hu, Zhengbiao Zhang, Maoliang Lv, Cheng Jin, Liyuan Zhou, Lingyan Wang, Zhengping Yao, Jincao |
author_sort | Qi, Xiaoyang |
collection | PubMed |
description | OBJECTIVE: To establish machine learning (ML) prediction models for prostate cancer (PCa) using transrectal ultrasound videos and multi-parametric magnetic resonance imaging (mpMRI) and compare their diagnostic performance. MATERIALS AND METHODS: We systematically collated the data of 383 patients, including 187 with PCa and 196 with benign lesions. Of them, 307 patients (150 with PCa and 157 with benign lesions) were randomly selected to train and validate the ML models, 76 patients were used as test set. B-Ultrasound videos (BUS), mpMRI T2 sequence (T2), and ADC sequence (ADC) were obtained from all patients. We extracted 851 features of each patient in the BUS, T2, and ADC groups and used a t-test, the Mann–Whitney U test, and LASSO regression to screen the features. Support vector machine (SVM), random forest (RF), adaptive boosting (ADB), and gradient boosting machine (GBM) models were used to establish radiomics models. In addition, we fused the features screened via LASSO regression from three groups as new features and rebuilt ML models. The performance of the ML models in diagnosing PCa in the BUS, T2, ADC, and fusion groups was compared using the area under the ROC curve (AUC), sensitivity, specificity, and accuracy. RESULTS: In the test cohort, the AUC of each model in the ADC group was higher than that of in the.BUS and T2 groups. Among the models, the RF model had the best diagnostic performance, with an AUC of 0.85, sensitivity of 0.78 (0.61–0.89), specificity of 0.84 (0.69–0.94), and accuracy of 0.83 (0.66–0.93). The SVM model in both the BUS and T2 groups performed best. Based on the features screened in the BUS, T2, and ADC groups fused to construct the models, the SVM model was found to perform best, with an AUC of 0.87, sensitivity of 0.73 (0.56–0.86), specificity of 0.79 (0.63–0.90), and accuracy of 0.77 (0.59–0.89). The difference in the results was statistically significant (p<0.05). CONCLUSION: The ML prediction models had a good diagnostic ability for PCa. Among them, the SVM model in the fusion group showed the best performance in diagnosing PCa. These prediction models can help radiologists make better diagnoses. |
format | Online Article Text |
id | pubmed-10227569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102275692023-05-31 Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer Qi, Xiaoyang Wang, Kai Feng, Bojian Sun, Xingbo Yang, Jie Hu, Zhengbiao Zhang, Maoliang Lv, Cheng Jin, Liyuan Zhou, Lingyan Wang, Zhengping Yao, Jincao Front Oncol Oncology OBJECTIVE: To establish machine learning (ML) prediction models for prostate cancer (PCa) using transrectal ultrasound videos and multi-parametric magnetic resonance imaging (mpMRI) and compare their diagnostic performance. MATERIALS AND METHODS: We systematically collated the data of 383 patients, including 187 with PCa and 196 with benign lesions. Of them, 307 patients (150 with PCa and 157 with benign lesions) were randomly selected to train and validate the ML models, 76 patients were used as test set. B-Ultrasound videos (BUS), mpMRI T2 sequence (T2), and ADC sequence (ADC) were obtained from all patients. We extracted 851 features of each patient in the BUS, T2, and ADC groups and used a t-test, the Mann–Whitney U test, and LASSO regression to screen the features. Support vector machine (SVM), random forest (RF), adaptive boosting (ADB), and gradient boosting machine (GBM) models were used to establish radiomics models. In addition, we fused the features screened via LASSO regression from three groups as new features and rebuilt ML models. The performance of the ML models in diagnosing PCa in the BUS, T2, ADC, and fusion groups was compared using the area under the ROC curve (AUC), sensitivity, specificity, and accuracy. RESULTS: In the test cohort, the AUC of each model in the ADC group was higher than that of in the.BUS and T2 groups. Among the models, the RF model had the best diagnostic performance, with an AUC of 0.85, sensitivity of 0.78 (0.61–0.89), specificity of 0.84 (0.69–0.94), and accuracy of 0.83 (0.66–0.93). The SVM model in both the BUS and T2 groups performed best. Based on the features screened in the BUS, T2, and ADC groups fused to construct the models, the SVM model was found to perform best, with an AUC of 0.87, sensitivity of 0.73 (0.56–0.86), specificity of 0.79 (0.63–0.90), and accuracy of 0.77 (0.59–0.89). The difference in the results was statistically significant (p<0.05). CONCLUSION: The ML prediction models had a good diagnostic ability for PCa. Among them, the SVM model in the fusion group showed the best performance in diagnosing PCa. These prediction models can help radiologists make better diagnoses. Frontiers Media S.A. 2023-05-16 /pmc/articles/PMC10227569/ /pubmed/37260984 http://dx.doi.org/10.3389/fonc.2023.1157949 Text en Copyright © 2023 Qi, Wang, Feng, Sun, Yang, Hu, Zhang, Lv, Jin, Zhou, Wang and Yao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Qi, Xiaoyang Wang, Kai Feng, Bojian Sun, Xingbo Yang, Jie Hu, Zhengbiao Zhang, Maoliang Lv, Cheng Jin, Liyuan Zhou, Lingyan Wang, Zhengping Yao, Jincao Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title | Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title_full | Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title_fullStr | Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title_full_unstemmed | Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title_short | Comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
title_sort | comparison of machine learning models based on multi-parametric magnetic resonance imaging and ultrasound videos for the prediction of prostate cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10227569/ https://www.ncbi.nlm.nih.gov/pubmed/37260984 http://dx.doi.org/10.3389/fonc.2023.1157949 |
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