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Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis
Endometriosis (EMs) is a life-long endocrine disorder and a common cause for female infertility and pelvic pain. The key characteristics of eutopic endometrium of EMs patients are high proliferative and migratory potentials. Cuproptosis is a recently identified copper- and-mitochondrial-dependent re...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10229735/ https://www.ncbi.nlm.nih.gov/pubmed/36474131 http://dx.doi.org/10.1007/s43032-022-01130-7 |
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author | Wei, Jiahui Huang, Baoyi Nong, Yingqi Zhang, Qianyu Liu, Wenjuan Xie, Yanni Peng, Tong Wang, Wei Liang, Xiangping Li, Qiuyun Liu, Fenghua |
author_facet | Wei, Jiahui Huang, Baoyi Nong, Yingqi Zhang, Qianyu Liu, Wenjuan Xie, Yanni Peng, Tong Wang, Wei Liang, Xiangping Li, Qiuyun Liu, Fenghua |
author_sort | Wei, Jiahui |
collection | PubMed |
description | Endometriosis (EMs) is a life-long endocrine disorder and a common cause for female infertility and pelvic pain. The key characteristics of eutopic endometrium of EMs patients are high proliferative and migratory potentials. Cuproptosis is a recently identified copper- and-mitochondrial-dependent regulated cell death. Regretfully, its role in EMs remains unclear. In this study, Kyoto Encyclopedia of Genes and Genomes analyses of differentially expressed genes (DEGs) indicated strong activation of the PI3K-Akt-mTOR pathway and biological process analysis reported positive regulation of kinase activity. Next, we screened 11 cuproptosis-related DEGs and found all of them were downregulated in the EMs group, which indicated the suppression of cuproptosis in EMs. One key cuproptosis-related gene, PDHA1, was selected via support vector machine, random forest algorithm and lasso regularization to build a risk-scoring model, which was tested in both internal and external validations. In conclusion, the downregulation and kinase activity of PDHA1 may function with the PI3K-Akt-mTOR pathway in some way, which could suppress the cuproptosis level and account for the cancer-like pathology in EMs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s43032-022-01130-7. |
format | Online Article Text |
id | pubmed-10229735 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-102297352023-06-01 Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis Wei, Jiahui Huang, Baoyi Nong, Yingqi Zhang, Qianyu Liu, Wenjuan Xie, Yanni Peng, Tong Wang, Wei Liang, Xiangping Li, Qiuyun Liu, Fenghua Reprod Sci Endometriosis: Original Article Endometriosis (EMs) is a life-long endocrine disorder and a common cause for female infertility and pelvic pain. The key characteristics of eutopic endometrium of EMs patients are high proliferative and migratory potentials. Cuproptosis is a recently identified copper- and-mitochondrial-dependent regulated cell death. Regretfully, its role in EMs remains unclear. In this study, Kyoto Encyclopedia of Genes and Genomes analyses of differentially expressed genes (DEGs) indicated strong activation of the PI3K-Akt-mTOR pathway and biological process analysis reported positive regulation of kinase activity. Next, we screened 11 cuproptosis-related DEGs and found all of them were downregulated in the EMs group, which indicated the suppression of cuproptosis in EMs. One key cuproptosis-related gene, PDHA1, was selected via support vector machine, random forest algorithm and lasso regularization to build a risk-scoring model, which was tested in both internal and external validations. In conclusion, the downregulation and kinase activity of PDHA1 may function with the PI3K-Akt-mTOR pathway in some way, which could suppress the cuproptosis level and account for the cancer-like pathology in EMs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s43032-022-01130-7. Springer International Publishing 2022-12-06 /pmc/articles/PMC10229735/ /pubmed/36474131 http://dx.doi.org/10.1007/s43032-022-01130-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Endometriosis: Original Article Wei, Jiahui Huang, Baoyi Nong, Yingqi Zhang, Qianyu Liu, Wenjuan Xie, Yanni Peng, Tong Wang, Wei Liang, Xiangping Li, Qiuyun Liu, Fenghua Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title | Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title_full | Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title_fullStr | Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title_full_unstemmed | Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title_short | Identification of a Novel Cuproptosis-Related Gene Signature in Eutopic Endometrium of Women with Endometriosis |
title_sort | identification of a novel cuproptosis-related gene signature in eutopic endometrium of women with endometriosis |
topic | Endometriosis: Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10229735/ https://www.ncbi.nlm.nih.gov/pubmed/36474131 http://dx.doi.org/10.1007/s43032-022-01130-7 |
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