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Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells

Transport processes of many structures inside living cells display anomalous diffusion, such as endosomes in eukaryotic cells. They are also heterogeneous in space and time. Large ensembles of single particle trajectories allow the heterogeneities to be quantified in detail and provide insights for...

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Autores principales: Korabel, Nickolay, Taloni, Alessandro, Pagnini, Gianni, Allan, Viki, Fedotov, Sergei, Waigh, Thomas Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10232472/
https://www.ncbi.nlm.nih.gov/pubmed/37258614
http://dx.doi.org/10.1038/s41598-023-35903-0
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author Korabel, Nickolay
Taloni, Alessandro
Pagnini, Gianni
Allan, Viki
Fedotov, Sergei
Waigh, Thomas Andrew
author_facet Korabel, Nickolay
Taloni, Alessandro
Pagnini, Gianni
Allan, Viki
Fedotov, Sergei
Waigh, Thomas Andrew
author_sort Korabel, Nickolay
collection PubMed
description Transport processes of many structures inside living cells display anomalous diffusion, such as endosomes in eukaryotic cells. They are also heterogeneous in space and time. Large ensembles of single particle trajectories allow the heterogeneities to be quantified in detail and provide insights for mathematical modelling. The development of accurate mathematical models for heterogeneous dynamics has the potential to enable the design and optimization of various technological applications, for example, the design of effective drug delivery systems. Central questions in the analysis of anomalous dynamics are ergodicity and statistical ageing which allow for selecting the proper model for the description. It is believed that non-ergodicity and ageing occur concurrently. However, we found that the anomalous dynamics of endosomes is paradoxical since it is ergodic but shows ageing. We show that this behaviour is caused by ensemble heterogeneity that, in addition to space-time heterogeneity within a single trajectory, is an inherent property of endosomal motion. Our work introduces novel approaches for the analysis and modelling of heterogeneous dynamics.
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spelling pubmed-102324722023-06-02 Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells Korabel, Nickolay Taloni, Alessandro Pagnini, Gianni Allan, Viki Fedotov, Sergei Waigh, Thomas Andrew Sci Rep Article Transport processes of many structures inside living cells display anomalous diffusion, such as endosomes in eukaryotic cells. They are also heterogeneous in space and time. Large ensembles of single particle trajectories allow the heterogeneities to be quantified in detail and provide insights for mathematical modelling. The development of accurate mathematical models for heterogeneous dynamics has the potential to enable the design and optimization of various technological applications, for example, the design of effective drug delivery systems. Central questions in the analysis of anomalous dynamics are ergodicity and statistical ageing which allow for selecting the proper model for the description. It is believed that non-ergodicity and ageing occur concurrently. However, we found that the anomalous dynamics of endosomes is paradoxical since it is ergodic but shows ageing. We show that this behaviour is caused by ensemble heterogeneity that, in addition to space-time heterogeneity within a single trajectory, is an inherent property of endosomal motion. Our work introduces novel approaches for the analysis and modelling of heterogeneous dynamics. Nature Publishing Group UK 2023-05-31 /pmc/articles/PMC10232472/ /pubmed/37258614 http://dx.doi.org/10.1038/s41598-023-35903-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Korabel, Nickolay
Taloni, Alessandro
Pagnini, Gianni
Allan, Viki
Fedotov, Sergei
Waigh, Thomas Andrew
Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title_full Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title_fullStr Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title_full_unstemmed Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title_short Ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
title_sort ensemble heterogeneity mimics ageing for endosomal dynamics within eukaryotic cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10232472/
https://www.ncbi.nlm.nih.gov/pubmed/37258614
http://dx.doi.org/10.1038/s41598-023-35903-0
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