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Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes
BACKGROUND: Driven by increased prevalence of type 2 diabetes and ageing populations, wounds affect millions of people each year, but monitoring and treatment remain limited. Glucocorticoid (stress hormones) activation by the enzyme 11β‐hydroxysteroid dehydrogenase type 1 (11β‐HSD1) also impairs hea...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10233090/ https://www.ncbi.nlm.nih.gov/pubmed/37275432 http://dx.doi.org/10.1002/ski2.203 |
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author | Wang, Yinhai Freeman, Adrian Ajjan, Ramzi Del Galdo, Francesco Tiganescu, Ana |
author_facet | Wang, Yinhai Freeman, Adrian Ajjan, Ramzi Del Galdo, Francesco Tiganescu, Ana |
author_sort | Wang, Yinhai |
collection | PubMed |
description | BACKGROUND: Driven by increased prevalence of type 2 diabetes and ageing populations, wounds affect millions of people each year, but monitoring and treatment remain limited. Glucocorticoid (stress hormones) activation by the enzyme 11β‐hydroxysteroid dehydrogenase type 1 (11β‐HSD1) also impairs healing. We recently reported that 11β‐HSD1 inhibition with oral AZD4017 improves acute wound healing by manual 2D optical coherence tomography (OCT), although this method is subjective and labour‐intensive. OBJECTIVES: Here, we aimed to develop an automated method of 3D OCT for rapid identification and quantification of multiple wound morphologies. METHODS: We analysed 204 3D OCT scans of 3 mm punch biopsies representing 24 480 2D wound image frames. A u‐net method was used for image segmentation into 4 key wound morphologies: early granulation tissue, late granulation tissue, neo‐epidermis, and blood clot. U‐net training was conducted with 0.2% of available frames, with a mini‐batch accuracy of 86%. The trained model was applied to compare segment area (per frame) and volume (per scan) at days 2 and 7 post‐wounding and in AZD4017 compared to placebo. RESULTS: Automated OCT distinguished wound tissue morphologies, quantifying their volumetric transition during healing, and correlating with corresponding manual measurements. Further, AZD4017 improved epidermal re‐epithelialisation (by manual OCT) with a corresponding trend towards increased neo‐epidermis volume (by automated OCT). CONCLUSION: Machine learning and OCT can quantify wound healing for automated, non‐invasive monitoring in real‐time. This sensitive and reproducible new approach offers a step‐change in wound healing research, paving the way for further development in chronic wounds. |
format | Online Article Text |
id | pubmed-10233090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102330902023-06-02 Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes Wang, Yinhai Freeman, Adrian Ajjan, Ramzi Del Galdo, Francesco Tiganescu, Ana Skin Health Dis Original Articles BACKGROUND: Driven by increased prevalence of type 2 diabetes and ageing populations, wounds affect millions of people each year, but monitoring and treatment remain limited. Glucocorticoid (stress hormones) activation by the enzyme 11β‐hydroxysteroid dehydrogenase type 1 (11β‐HSD1) also impairs healing. We recently reported that 11β‐HSD1 inhibition with oral AZD4017 improves acute wound healing by manual 2D optical coherence tomography (OCT), although this method is subjective and labour‐intensive. OBJECTIVES: Here, we aimed to develop an automated method of 3D OCT for rapid identification and quantification of multiple wound morphologies. METHODS: We analysed 204 3D OCT scans of 3 mm punch biopsies representing 24 480 2D wound image frames. A u‐net method was used for image segmentation into 4 key wound morphologies: early granulation tissue, late granulation tissue, neo‐epidermis, and blood clot. U‐net training was conducted with 0.2% of available frames, with a mini‐batch accuracy of 86%. The trained model was applied to compare segment area (per frame) and volume (per scan) at days 2 and 7 post‐wounding and in AZD4017 compared to placebo. RESULTS: Automated OCT distinguished wound tissue morphologies, quantifying their volumetric transition during healing, and correlating with corresponding manual measurements. Further, AZD4017 improved epidermal re‐epithelialisation (by manual OCT) with a corresponding trend towards increased neo‐epidermis volume (by automated OCT). CONCLUSION: Machine learning and OCT can quantify wound healing for automated, non‐invasive monitoring in real‐time. This sensitive and reproducible new approach offers a step‐change in wound healing research, paving the way for further development in chronic wounds. John Wiley and Sons Inc. 2022-12-21 /pmc/articles/PMC10233090/ /pubmed/37275432 http://dx.doi.org/10.1002/ski2.203 Text en © 2022 The Authors. Skin Health and Disease published by John Wiley & Sons Ltd on behalf of British Association of Dermatologists. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Wang, Yinhai Freeman, Adrian Ajjan, Ramzi Del Galdo, Francesco Tiganescu, Ana Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title | Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title_full | Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title_fullStr | Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title_full_unstemmed | Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title_short | Automated quantification of 3D wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
title_sort | automated quantification of 3d wound morphology by machine learning and optical coherence tomography in type 2 diabetes |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10233090/ https://www.ncbi.nlm.nih.gov/pubmed/37275432 http://dx.doi.org/10.1002/ski2.203 |
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