Gaps and complex structurally variant loci in phased genome assemblies

There has been tremendous progress in phased genome assembly production by combining long-read data with parental information or linked-read data. Nevertheless, a typical phased genome assembly generated by trio-hifiasm still generates more than 140 gaps. We perform a detailed analysis of gaps, asse...

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Detalles Bibliográficos
Autores principales: Porubsky, David, Vollger, Mitchell R., Harvey, William T., Rozanski, Allison N., Ebert, Peter, Hickey, Glenn, Hasenfeld, Patrick, Sanders, Ashley D., Stober, Catherine, Korbel, Jan O., Paten, Benedict, Marschall, Tobias, Eichler, Evan E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2023
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10234299/
https://www.ncbi.nlm.nih.gov/pubmed/37164484
http://dx.doi.org/10.1101/gr.277334.122

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