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Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing

OBJECTIVES: Aberrantly expressed circular RNAs (circRNAs) have been detected in many types of tumors. Hence, they are currently investigated as candidate biomarkers for diagnostic and potential targets for therapy in cancers. The objective of this study was to assess the expression profile of circRN...

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Autores principales: Chen, Yongyang, Han, Xiaoling, Huang, Xiaobi, Zhou, Honglian, Yu, Hui, Wang, Lihui, Liu, Zijian, Liu, Baiyang, Huang, Jian, Xiong, Yinghuan, Shao, Yang, Zhu, Dongqin, Liang, Zhu, Yang, Zhixiong, Su, Wenmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons Australia, Ltd 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10234779/
https://www.ncbi.nlm.nih.gov/pubmed/37137710
http://dx.doi.org/10.1111/1759-7714.14884
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author Chen, Yongyang
Han, Xiaoling
Huang, Xiaobi
Zhou, Honglian
Yu, Hui
Wang, Lihui
Liu, Zijian
Liu, Baiyang
Huang, Jian
Xiong, Yinghuan
Huang, Jian
Shao, Yang
Zhu, Dongqin
Liang, Zhu
Yang, Zhixiong
Su, Wenmei
author_facet Chen, Yongyang
Han, Xiaoling
Huang, Xiaobi
Zhou, Honglian
Yu, Hui
Wang, Lihui
Liu, Zijian
Liu, Baiyang
Huang, Jian
Xiong, Yinghuan
Huang, Jian
Shao, Yang
Zhu, Dongqin
Liang, Zhu
Yang, Zhixiong
Su, Wenmei
author_sort Chen, Yongyang
collection PubMed
description OBJECTIVES: Aberrantly expressed circular RNAs (circRNAs) have been detected in many types of tumors. Hence, they are currently investigated as candidate biomarkers for diagnostic and potential targets for therapy in cancers. The objective of this study was to assess the expression profile of circRNA in lung adenocarcinoma (LUAD). METHODS: This study included 14 pairs of postoperative lung adenocarcinoma specimens, including cancer tissues and matched adjacent tissues. Second‐generation sequencing was applied to the specimens to determine the circRNA expression in them among the 5242 distinct circRNAs detected. RESULTS: We identified a total of 18 significantly dysregulated circRNAs in the LUAD tissues: upregulation in four and downregulation in 14. ROC (The receiver operating characteristic curve) further suggested that hsa_circ_0120106, has_circ_0007342, has_circ_0005937, and circRNA_0000826 could potentially be used as biomarkers in the diagnosis of LUAD. Furthermore, study of the circRNA–microRNA (miRNA)–messenger RNA (mRNA) revealed interactions between the 18 dysregulated circRNA and several cancer‐related miRNAs. Finally, a further Kyoto Encyclopedia of Genes and Genomes analysis showed that the cell cycle phase transition, p53 signaling pathway, AMP‐activated protein kinase (AMPK) relative signaling pathway, and so on were key putative pathways in the process of LUAD. CONCLUSIONS: These findings demonstrated the correlation between abnormality in circRNA expression and LUAD, which lays the foundation of making CircRNAs candidate biomarkers in the diagnosis of LUAD.
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spelling pubmed-102347792023-06-03 Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing Chen, Yongyang Han, Xiaoling Huang, Xiaobi Zhou, Honglian Yu, Hui Wang, Lihui Liu, Zijian Liu, Baiyang Huang, Jian Xiong, Yinghuan Huang, Jian Shao, Yang Zhu, Dongqin Liang, Zhu Yang, Zhixiong Su, Wenmei Thorac Cancer Original Articles OBJECTIVES: Aberrantly expressed circular RNAs (circRNAs) have been detected in many types of tumors. Hence, they are currently investigated as candidate biomarkers for diagnostic and potential targets for therapy in cancers. The objective of this study was to assess the expression profile of circRNA in lung adenocarcinoma (LUAD). METHODS: This study included 14 pairs of postoperative lung adenocarcinoma specimens, including cancer tissues and matched adjacent tissues. Second‐generation sequencing was applied to the specimens to determine the circRNA expression in them among the 5242 distinct circRNAs detected. RESULTS: We identified a total of 18 significantly dysregulated circRNAs in the LUAD tissues: upregulation in four and downregulation in 14. ROC (The receiver operating characteristic curve) further suggested that hsa_circ_0120106, has_circ_0007342, has_circ_0005937, and circRNA_0000826 could potentially be used as biomarkers in the diagnosis of LUAD. Furthermore, study of the circRNA–microRNA (miRNA)–messenger RNA (mRNA) revealed interactions between the 18 dysregulated circRNA and several cancer‐related miRNAs. Finally, a further Kyoto Encyclopedia of Genes and Genomes analysis showed that the cell cycle phase transition, p53 signaling pathway, AMP‐activated protein kinase (AMPK) relative signaling pathway, and so on were key putative pathways in the process of LUAD. CONCLUSIONS: These findings demonstrated the correlation between abnormality in circRNA expression and LUAD, which lays the foundation of making CircRNAs candidate biomarkers in the diagnosis of LUAD. John Wiley & Sons Australia, Ltd 2023-05-03 /pmc/articles/PMC10234779/ /pubmed/37137710 http://dx.doi.org/10.1111/1759-7714.14884 Text en © 2023 The Authors. Thoracic Cancer published by China Lung Oncology Group and John Wiley & Sons Australia, Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Chen, Yongyang
Han, Xiaoling
Huang, Xiaobi
Zhou, Honglian
Yu, Hui
Wang, Lihui
Liu, Zijian
Liu, Baiyang
Huang, Jian
Xiong, Yinghuan
Huang, Jian
Shao, Yang
Zhu, Dongqin
Liang, Zhu
Yang, Zhixiong
Su, Wenmei
Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title_full Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title_fullStr Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title_full_unstemmed Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title_short Circular RNA‐mediated ceRNA network was identified in human lung adenocarcinoma by high‐throughput sequencing
title_sort circular rna‐mediated cerna network was identified in human lung adenocarcinoma by high‐throughput sequencing
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10234779/
https://www.ncbi.nlm.nih.gov/pubmed/37137710
http://dx.doi.org/10.1111/1759-7714.14884
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