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Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research

Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcripto...

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Detalles Bibliográficos
Autores principales: Park, Han‐Eol, Jo, Song Hyun, Lee, Rosalind H., Macks, Christian P., Ku, Taeyun, Park, Jihwan, Lee, Chung Whan, Hur, Junho K., Sohn, Chang Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238226/
https://www.ncbi.nlm.nih.gov/pubmed/37026425
http://dx.doi.org/10.1002/advs.202206939
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author Park, Han‐Eol
Jo, Song Hyun
Lee, Rosalind H.
Macks, Christian P.
Ku, Taeyun
Park, Jihwan
Lee, Chung Whan
Hur, Junho K.
Sohn, Chang Ho
author_facet Park, Han‐Eol
Jo, Song Hyun
Lee, Rosalind H.
Macks, Christian P.
Ku, Taeyun
Park, Jihwan
Lee, Chung Whan
Hur, Junho K.
Sohn, Chang Ho
author_sort Park, Han‐Eol
collection PubMed
description Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcriptomics can provide transcriptome‐scale spatial information. Currently, the ability to simultaneously characterize gene expression profiles of cells and relevant cellular environment is a paradigm shift for biological studies. In this review, recent progress in spatial transcriptomics and its applications in neuroscience and cancer studies are highlighted. Technical aspects of existing technologies and future directions of new developments (as of March 2023), computational analysis of spatial transcriptome data, application notes in neuroscience and cancer studies, and discussions regarding future directions of spatial multi‐omics and their expanding roles in biomedical applications are emphasized.
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spelling pubmed-102382262023-06-04 Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research Park, Han‐Eol Jo, Song Hyun Lee, Rosalind H. Macks, Christian P. Ku, Taeyun Park, Jihwan Lee, Chung Whan Hur, Junho K. Sohn, Chang Ho Adv Sci (Weinh) Reviews Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcriptomics can provide transcriptome‐scale spatial information. Currently, the ability to simultaneously characterize gene expression profiles of cells and relevant cellular environment is a paradigm shift for biological studies. In this review, recent progress in spatial transcriptomics and its applications in neuroscience and cancer studies are highlighted. Technical aspects of existing technologies and future directions of new developments (as of March 2023), computational analysis of spatial transcriptome data, application notes in neuroscience and cancer studies, and discussions regarding future directions of spatial multi‐omics and their expanding roles in biomedical applications are emphasized. John Wiley and Sons Inc. 2023-04-07 /pmc/articles/PMC10238226/ /pubmed/37026425 http://dx.doi.org/10.1002/advs.202206939 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reviews
Park, Han‐Eol
Jo, Song Hyun
Lee, Rosalind H.
Macks, Christian P.
Ku, Taeyun
Park, Jihwan
Lee, Chung Whan
Hur, Junho K.
Sohn, Chang Ho
Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title_full Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title_fullStr Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title_full_unstemmed Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title_short Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
title_sort spatial transcriptomics: technical aspects of recent developments and their applications in neuroscience and cancer research
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238226/
https://www.ncbi.nlm.nih.gov/pubmed/37026425
http://dx.doi.org/10.1002/advs.202206939
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