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Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research
Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcripto...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238226/ https://www.ncbi.nlm.nih.gov/pubmed/37026425 http://dx.doi.org/10.1002/advs.202206939 |
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author | Park, Han‐Eol Jo, Song Hyun Lee, Rosalind H. Macks, Christian P. Ku, Taeyun Park, Jihwan Lee, Chung Whan Hur, Junho K. Sohn, Chang Ho |
author_facet | Park, Han‐Eol Jo, Song Hyun Lee, Rosalind H. Macks, Christian P. Ku, Taeyun Park, Jihwan Lee, Chung Whan Hur, Junho K. Sohn, Chang Ho |
author_sort | Park, Han‐Eol |
collection | PubMed |
description | Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcriptomics can provide transcriptome‐scale spatial information. Currently, the ability to simultaneously characterize gene expression profiles of cells and relevant cellular environment is a paradigm shift for biological studies. In this review, recent progress in spatial transcriptomics and its applications in neuroscience and cancer studies are highlighted. Technical aspects of existing technologies and future directions of new developments (as of March 2023), computational analysis of spatial transcriptome data, application notes in neuroscience and cancer studies, and discussions regarding future directions of spatial multi‐omics and their expanding roles in biomedical applications are emphasized. |
format | Online Article Text |
id | pubmed-10238226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102382262023-06-04 Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research Park, Han‐Eol Jo, Song Hyun Lee, Rosalind H. Macks, Christian P. Ku, Taeyun Park, Jihwan Lee, Chung Whan Hur, Junho K. Sohn, Chang Ho Adv Sci (Weinh) Reviews Spatial transcriptomics is a newly emerging field that enables high‐throughput investigation of the spatial localization of transcripts and related analyses in various applications for biological systems. By transitioning from conventional biological studies to “in situ” biology, spatial transcriptomics can provide transcriptome‐scale spatial information. Currently, the ability to simultaneously characterize gene expression profiles of cells and relevant cellular environment is a paradigm shift for biological studies. In this review, recent progress in spatial transcriptomics and its applications in neuroscience and cancer studies are highlighted. Technical aspects of existing technologies and future directions of new developments (as of March 2023), computational analysis of spatial transcriptome data, application notes in neuroscience and cancer studies, and discussions regarding future directions of spatial multi‐omics and their expanding roles in biomedical applications are emphasized. John Wiley and Sons Inc. 2023-04-07 /pmc/articles/PMC10238226/ /pubmed/37026425 http://dx.doi.org/10.1002/advs.202206939 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Reviews Park, Han‐Eol Jo, Song Hyun Lee, Rosalind H. Macks, Christian P. Ku, Taeyun Park, Jihwan Lee, Chung Whan Hur, Junho K. Sohn, Chang Ho Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title | Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title_full | Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title_fullStr | Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title_full_unstemmed | Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title_short | Spatial Transcriptomics: Technical Aspects of Recent Developments and Their Applications in Neuroscience and Cancer Research |
title_sort | spatial transcriptomics: technical aspects of recent developments and their applications in neuroscience and cancer research |
topic | Reviews |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238226/ https://www.ncbi.nlm.nih.gov/pubmed/37026425 http://dx.doi.org/10.1002/advs.202206939 |
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