Curated and harmonized gut microbiome 16S rRNA amplicon data from dietary fiber intervention studies in humans

Next generation amplicon sequencing has created a plethora of data from human microbiomes. The accessibility to this scientific data and its corresponding metadata is important for its reuse, to allow for new discoveries, verification of published results, and serving as path for reproducibility. Di...

Descripción completa

Detalles Bibliográficos
Autores principales: Rodriguez, Cynthia I., Keshavarzian, Ali, Hamaker, Bruce R., Liu, Feitong, Lunken, Genelle R., Rasmussen, Heather, Zhou, Hongwei, Tap, Julien, Swanson, Kelly S., Ukhanova, Maria, Leclerc, Marion, Gotteland, Martin, Navarrete, Paola, Kovatcheva-Datchary, Petia, Dahl, Wendy J., Martiny, Jennifer B. H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Data Descriptor
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238384/
https://www.ncbi.nlm.nih.gov/pubmed/37268699
http://dx.doi.org/10.1038/s41597-023-02254-4
Descripción
Sumario:Next generation amplicon sequencing has created a plethora of data from human microbiomes. The accessibility to this scientific data and its corresponding metadata is important for its reuse, to allow for new discoveries, verification of published results, and serving as path for reproducibility. Dietary fiber consumption has been associated with a variety of health benefits that are thought to be mediated by gut microbiota. To enable direct comparisons of the response of the gut microbiome to fiber, we obtained 16S rRNA sequencing data and its corresponding metadata from 11 fiber intervention studies for a total of 2,368 samples. We provide curated and pre-processed genetic data and common metadata for comparison across the different studies.

Ejemplares similares