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Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncove...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238738/ https://www.ncbi.nlm.nih.gov/pubmed/37274638 http://dx.doi.org/10.1016/j.heliyon.2023.e16479 |
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author | Guo, Tuanjie Jiang, Liren Wang, Tao Zhang, Jian Liu, Yang Wang, Xuan Zhang, Ning Chen, Siteng Wang, Xiang |
author_facet | Guo, Tuanjie Jiang, Liren Wang, Tao Zhang, Jian Liu, Yang Wang, Xuan Zhang, Ning Chen, Siteng Wang, Xiang |
author_sort | Guo, Tuanjie |
collection | PubMed |
description | Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncovered that under an optical microscope ccRCC with eosinophilic features has a poor prognosis. Eosinophilic ccRCC tends to have a higher histologic grade. Eosinophilic ccRCC has 16 genes significantly up-regulated compared with ccRCC, of which seven genes have multi-cohort validation prognostic value. Immune infiltration analysis suggested a low number of M1 macrophages and NK tissue-resident cells in eosinophilic ccRCC. Enrichment analysis suggests that ccRCC with eosinophilic features may be closely associated with the transport and metabolism of many substances. The findings of this study have important implications for the study of the malignant transformation of ccRCC. |
format | Online Article Text |
id | pubmed-10238738 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-102387382023-06-04 Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() Guo, Tuanjie Jiang, Liren Wang, Tao Zhang, Jian Liu, Yang Wang, Xuan Zhang, Ning Chen, Siteng Wang, Xiang Heliyon Research Article Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncovered that under an optical microscope ccRCC with eosinophilic features has a poor prognosis. Eosinophilic ccRCC tends to have a higher histologic grade. Eosinophilic ccRCC has 16 genes significantly up-regulated compared with ccRCC, of which seven genes have multi-cohort validation prognostic value. Immune infiltration analysis suggested a low number of M1 macrophages and NK tissue-resident cells in eosinophilic ccRCC. Enrichment analysis suggests that ccRCC with eosinophilic features may be closely associated with the transport and metabolism of many substances. The findings of this study have important implications for the study of the malignant transformation of ccRCC. Elsevier 2023-05-24 /pmc/articles/PMC10238738/ /pubmed/37274638 http://dx.doi.org/10.1016/j.heliyon.2023.e16479 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Guo, Tuanjie Jiang, Liren Wang, Tao Zhang, Jian Liu, Yang Wang, Xuan Zhang, Ning Chen, Siteng Wang, Xiang Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title | Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title_full | Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title_fullStr | Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title_full_unstemmed | Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title_short | Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
title_sort | screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238738/ https://www.ncbi.nlm.nih.gov/pubmed/37274638 http://dx.doi.org/10.1016/j.heliyon.2023.e16479 |
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