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Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()

Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncove...

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Autores principales: Guo, Tuanjie, Jiang, Liren, Wang, Tao, Zhang, Jian, Liu, Yang, Wang, Xuan, Zhang, Ning, Chen, Siteng, Wang, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238738/
https://www.ncbi.nlm.nih.gov/pubmed/37274638
http://dx.doi.org/10.1016/j.heliyon.2023.e16479
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author Guo, Tuanjie
Jiang, Liren
Wang, Tao
Zhang, Jian
Liu, Yang
Wang, Xuan
Zhang, Ning
Chen, Siteng
Wang, Xiang
author_facet Guo, Tuanjie
Jiang, Liren
Wang, Tao
Zhang, Jian
Liu, Yang
Wang, Xuan
Zhang, Ning
Chen, Siteng
Wang, Xiang
author_sort Guo, Tuanjie
collection PubMed
description Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncovered that under an optical microscope ccRCC with eosinophilic features has a poor prognosis. Eosinophilic ccRCC tends to have a higher histologic grade. Eosinophilic ccRCC has 16 genes significantly up-regulated compared with ccRCC, of which seven genes have multi-cohort validation prognostic value. Immune infiltration analysis suggested a low number of M1 macrophages and NK tissue-resident cells in eosinophilic ccRCC. Enrichment analysis suggests that ccRCC with eosinophilic features may be closely associated with the transport and metabolism of many substances. The findings of this study have important implications for the study of the malignant transformation of ccRCC.
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spelling pubmed-102387382023-06-04 Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma() Guo, Tuanjie Jiang, Liren Wang, Tao Zhang, Jian Liu, Yang Wang, Xuan Zhang, Ning Chen, Siteng Wang, Xiang Heliyon Research Article Clear cell renal cell carcinoma (ccRCC) is the most common subtype of renal cell carcinoma, which is characterized by transparent cytoplasm. However, some ccRCC also show eosinophilic cytoplasm, and the molecular difference between eosinophilic and clear subtypes is unclear. In this study, we uncovered that under an optical microscope ccRCC with eosinophilic features has a poor prognosis. Eosinophilic ccRCC tends to have a higher histologic grade. Eosinophilic ccRCC has 16 genes significantly up-regulated compared with ccRCC, of which seven genes have multi-cohort validation prognostic value. Immune infiltration analysis suggested a low number of M1 macrophages and NK tissue-resident cells in eosinophilic ccRCC. Enrichment analysis suggests that ccRCC with eosinophilic features may be closely associated with the transport and metabolism of many substances. The findings of this study have important implications for the study of the malignant transformation of ccRCC. Elsevier 2023-05-24 /pmc/articles/PMC10238738/ /pubmed/37274638 http://dx.doi.org/10.1016/j.heliyon.2023.e16479 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Guo, Tuanjie
Jiang, Liren
Wang, Tao
Zhang, Jian
Liu, Yang
Wang, Xuan
Zhang, Ning
Chen, Siteng
Wang, Xiang
Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title_full Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title_fullStr Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title_full_unstemmed Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title_short Screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
title_sort screening and identification of prognostic genes associated with eosinophilic features of clear cell renal cell carcinoma()
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238738/
https://www.ncbi.nlm.nih.gov/pubmed/37274638
http://dx.doi.org/10.1016/j.heliyon.2023.e16479
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