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TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography

Heart chamber quantification is an essential clinical task to analyze heart abnormalities by evaluating the heart volume estimated through the endocardial border of the chambers. A precise heart chamber segmentation algorithm using echocardiography is essential for improving the diagnosis of cardiac...

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Autor principal: Lal, Shyam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238771/
https://www.ncbi.nlm.nih.gov/pubmed/37362663
http://dx.doi.org/10.1007/s11042-023-15524-5
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author Lal, Shyam
author_facet Lal, Shyam
author_sort Lal, Shyam
collection PubMed
description Heart chamber quantification is an essential clinical task to analyze heart abnormalities by evaluating the heart volume estimated through the endocardial border of the chambers. A precise heart chamber segmentation algorithm using echocardiography is essential for improving the diagnosis of cardiac disease. This paper proposes a robust two chamber segmentation network (TC-SegNet) for echocardiography which follows a U-Net architecture and effectively incorporates the proposed modified skip connection, Atrous Spatial Pyramid Pooling (ASPP) modules and squeeze and excitation modules. The TC-SegNet is evaluated on the open-source fully annotated dataset of cardiac acquisitions for multi-structure ultrasound segmentation (CAMUS). The proposed TC-SegNet obtained an average value of F1-score of 0.91, an average Dice score of 0.9284 and an IoU score of 0.8322 which are higher than the reference models used here for comparison. Further, Pixel error (PE) of 1.5109 which are significantly less than the comparison models. The segmentation results and metrics show that the proposed model outperforms the state-of-the-art segmentation methods.
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spelling pubmed-102387712023-06-06 TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography Lal, Shyam Multimed Tools Appl Article Heart chamber quantification is an essential clinical task to analyze heart abnormalities by evaluating the heart volume estimated through the endocardial border of the chambers. A precise heart chamber segmentation algorithm using echocardiography is essential for improving the diagnosis of cardiac disease. This paper proposes a robust two chamber segmentation network (TC-SegNet) for echocardiography which follows a U-Net architecture and effectively incorporates the proposed modified skip connection, Atrous Spatial Pyramid Pooling (ASPP) modules and squeeze and excitation modules. The TC-SegNet is evaluated on the open-source fully annotated dataset of cardiac acquisitions for multi-structure ultrasound segmentation (CAMUS). The proposed TC-SegNet obtained an average value of F1-score of 0.91, an average Dice score of 0.9284 and an IoU score of 0.8322 which are higher than the reference models used here for comparison. Further, Pixel error (PE) of 1.5109 which are significantly less than the comparison models. The segmentation results and metrics show that the proposed model outperforms the state-of-the-art segmentation methods. Springer US 2023-06-03 /pmc/articles/PMC10238771/ /pubmed/37362663 http://dx.doi.org/10.1007/s11042-023-15524-5 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Lal, Shyam
TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title_full TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title_fullStr TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title_full_unstemmed TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title_short TC-SegNet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
title_sort tc-segnet: robust deep learning network for fully automatic two-chamber segmentation of two-dimensional echocardiography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238771/
https://www.ncbi.nlm.nih.gov/pubmed/37362663
http://dx.doi.org/10.1007/s11042-023-15524-5
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