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Algae drive convergent bacterial community assembly at low dilution frequency
Microbial community assembly is a complex dynamical process that determines community structure and function. The interdependence of inter-species interactions and nutrient availability presents a challenge for understanding community assembly. We sought to understand how external nutrient supply ra...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238937/ https://www.ncbi.nlm.nih.gov/pubmed/37275519 http://dx.doi.org/10.1016/j.isci.2023.106879 |
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author | Prabhakara, Kaumudi H. Kuehn, Seppe |
author_facet | Prabhakara, Kaumudi H. Kuehn, Seppe |
author_sort | Prabhakara, Kaumudi H. |
collection | PubMed |
description | Microbial community assembly is a complex dynamical process that determines community structure and function. The interdependence of inter-species interactions and nutrient availability presents a challenge for understanding community assembly. We sought to understand how external nutrient supply rate modulated interactions to affect the assembly process. A statistical decomposition of taxonomic structures of bacterial communities assembled with and without algae and at varying dilution frequencies allowed the separation of the effects of biotic (presence of algae) and abiotic (dilution frequency) factors on community assembly. For infrequent dilutions, the algae strongly impact community assembly, driving initially diverse bacterial consortia to converge to a common structure. Analyzing sequencing data revealed that this convergence is largely mediated by a decline in the relative abundance of specific taxa in the presence of algae. This study shows that complex phototroph-heterotroph communities can be powerful model systems for understanding assembly processes relevant to the global ecosystem functioning. |
format | Online Article Text |
id | pubmed-10238937 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-102389372023-06-04 Algae drive convergent bacterial community assembly at low dilution frequency Prabhakara, Kaumudi H. Kuehn, Seppe iScience Article Microbial community assembly is a complex dynamical process that determines community structure and function. The interdependence of inter-species interactions and nutrient availability presents a challenge for understanding community assembly. We sought to understand how external nutrient supply rate modulated interactions to affect the assembly process. A statistical decomposition of taxonomic structures of bacterial communities assembled with and without algae and at varying dilution frequencies allowed the separation of the effects of biotic (presence of algae) and abiotic (dilution frequency) factors on community assembly. For infrequent dilutions, the algae strongly impact community assembly, driving initially diverse bacterial consortia to converge to a common structure. Analyzing sequencing data revealed that this convergence is largely mediated by a decline in the relative abundance of specific taxa in the presence of algae. This study shows that complex phototroph-heterotroph communities can be powerful model systems for understanding assembly processes relevant to the global ecosystem functioning. Elsevier 2023-05-16 /pmc/articles/PMC10238937/ /pubmed/37275519 http://dx.doi.org/10.1016/j.isci.2023.106879 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Prabhakara, Kaumudi H. Kuehn, Seppe Algae drive convergent bacterial community assembly at low dilution frequency |
title | Algae drive convergent bacterial community assembly at low dilution frequency |
title_full | Algae drive convergent bacterial community assembly at low dilution frequency |
title_fullStr | Algae drive convergent bacterial community assembly at low dilution frequency |
title_full_unstemmed | Algae drive convergent bacterial community assembly at low dilution frequency |
title_short | Algae drive convergent bacterial community assembly at low dilution frequency |
title_sort | algae drive convergent bacterial community assembly at low dilution frequency |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10238937/ https://www.ncbi.nlm.nih.gov/pubmed/37275519 http://dx.doi.org/10.1016/j.isci.2023.106879 |
work_keys_str_mv | AT prabhakarakaumudih algaedriveconvergentbacterialcommunityassemblyatlowdilutionfrequency AT kuehnseppe algaedriveconvergentbacterialcommunityassemblyatlowdilutionfrequency |