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Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data

Continuous-rotation 3D electron diffraction methods are increasingly popular for the structure analysis of very small organic molecular crystals and crystalline inorganic materials. Dynamical diffraction effects cause non-linear deviations from kinematical intensities that present issues in structur...

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Autores principales: Klar, Paul B., Krysiak, Yaşar, Xu, Hongyi, Steciuk, Gwladys, Cho, Jung, Zou, Xiaodong, Palatinus, Lukas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10239730/
https://www.ncbi.nlm.nih.gov/pubmed/37081207
http://dx.doi.org/10.1038/s41557-023-01186-1
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author Klar, Paul B.
Krysiak, Yaşar
Xu, Hongyi
Steciuk, Gwladys
Cho, Jung
Zou, Xiaodong
Palatinus, Lukas
author_facet Klar, Paul B.
Krysiak, Yaşar
Xu, Hongyi
Steciuk, Gwladys
Cho, Jung
Zou, Xiaodong
Palatinus, Lukas
author_sort Klar, Paul B.
collection PubMed
description Continuous-rotation 3D electron diffraction methods are increasingly popular for the structure analysis of very small organic molecular crystals and crystalline inorganic materials. Dynamical diffraction effects cause non-linear deviations from kinematical intensities that present issues in structure analysis. Here, a method for structure analysis of continuous-rotation 3D electron diffraction data is presented that takes multiple scattering effects into account. Dynamical and kinematical refinements of 12 compounds—ranging from small organic compounds to metal–organic frameworks to inorganic materials—are compared, for which the new approach yields significantly improved models in terms of accuracy and reliability with up to fourfold reduction of the noise level in difference Fourier maps. The intrinsic sensitivity of dynamical diffraction to the absolute structure is also used to assign the handedness of 58 crystals of 9 different chiral compounds, showing that 3D electron diffraction is a reliable tool for the routine determination of absolute structures. [Image: see text]
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spelling pubmed-102397302023-06-06 Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data Klar, Paul B. Krysiak, Yaşar Xu, Hongyi Steciuk, Gwladys Cho, Jung Zou, Xiaodong Palatinus, Lukas Nat Chem Article Continuous-rotation 3D electron diffraction methods are increasingly popular for the structure analysis of very small organic molecular crystals and crystalline inorganic materials. Dynamical diffraction effects cause non-linear deviations from kinematical intensities that present issues in structure analysis. Here, a method for structure analysis of continuous-rotation 3D electron diffraction data is presented that takes multiple scattering effects into account. Dynamical and kinematical refinements of 12 compounds—ranging from small organic compounds to metal–organic frameworks to inorganic materials—are compared, for which the new approach yields significantly improved models in terms of accuracy and reliability with up to fourfold reduction of the noise level in difference Fourier maps. The intrinsic sensitivity of dynamical diffraction to the absolute structure is also used to assign the handedness of 58 crystals of 9 different chiral compounds, showing that 3D electron diffraction is a reliable tool for the routine determination of absolute structures. [Image: see text] Nature Publishing Group UK 2023-04-20 2023 /pmc/articles/PMC10239730/ /pubmed/37081207 http://dx.doi.org/10.1038/s41557-023-01186-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Klar, Paul B.
Krysiak, Yaşar
Xu, Hongyi
Steciuk, Gwladys
Cho, Jung
Zou, Xiaodong
Palatinus, Lukas
Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title_full Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title_fullStr Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title_full_unstemmed Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title_short Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data
title_sort accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3d electron diffraction data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10239730/
https://www.ncbi.nlm.nih.gov/pubmed/37081207
http://dx.doi.org/10.1038/s41557-023-01186-1
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