Cargando…

Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA

INTRODUCTION: As part of the EU Joint Action on Antimicrobial Resistance (AMR) and Healthcare-Associated Infections, an initiative has been launched to build the European AMR Surveillance network in veterinary medicine (EARS-Vet). So far, activities included mapping national systems for AMR surveill...

Descripción completa

Detalles Bibliográficos
Autores principales: Lagrange, Justine, Amat, Jean-Philippe, Ballesteros, Cristina, Damborg, Peter, Grönthal, Thomas, Haenni, Marisa, Jouy, Eric, Kaspar, Heike, Kenny, Kevin, Klein, Babette, Lupo, Agnese, Madec, Jean-Yves, Salomonsen, Charlotte Mark, Müller, Elisabeth, Madero, Cristina Muñoz, Nilsson, Oskar, Norström, Madelaine, Nykäsenoja, Suvi, Overesch, Gudrun, Pedersen, Karl, Pohjanvirta, Tarja, Slowey, Rosemarie, Justo, Cristiana Teixeira, Urdahl, Anne Margrete, Zafeiridis, Christos, Zini, Eric, Cazeau, Géraldine, Jarrige, Nathalie, Collineau, Lucie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10239921/
https://www.ncbi.nlm.nih.gov/pubmed/37283921
http://dx.doi.org/10.3389/fmicb.2023.1188423
_version_ 1785053603177693184
author Lagrange, Justine
Amat, Jean-Philippe
Ballesteros, Cristina
Damborg, Peter
Grönthal, Thomas
Haenni, Marisa
Jouy, Eric
Kaspar, Heike
Kenny, Kevin
Klein, Babette
Lupo, Agnese
Madec, Jean-Yves
Salomonsen, Charlotte Mark
Müller, Elisabeth
Madero, Cristina Muñoz
Nilsson, Oskar
Norström, Madelaine
Nykäsenoja, Suvi
Overesch, Gudrun
Pedersen, Karl
Pohjanvirta, Tarja
Slowey, Rosemarie
Justo, Cristiana Teixeira
Urdahl, Anne Margrete
Zafeiridis, Christos
Zini, Eric
Cazeau, Géraldine
Jarrige, Nathalie
Collineau, Lucie
author_facet Lagrange, Justine
Amat, Jean-Philippe
Ballesteros, Cristina
Damborg, Peter
Grönthal, Thomas
Haenni, Marisa
Jouy, Eric
Kaspar, Heike
Kenny, Kevin
Klein, Babette
Lupo, Agnese
Madec, Jean-Yves
Salomonsen, Charlotte Mark
Müller, Elisabeth
Madero, Cristina Muñoz
Nilsson, Oskar
Norström, Madelaine
Nykäsenoja, Suvi
Overesch, Gudrun
Pedersen, Karl
Pohjanvirta, Tarja
Slowey, Rosemarie
Justo, Cristiana Teixeira
Urdahl, Anne Margrete
Zafeiridis, Christos
Zini, Eric
Cazeau, Géraldine
Jarrige, Nathalie
Collineau, Lucie
author_sort Lagrange, Justine
collection PubMed
description INTRODUCTION: As part of the EU Joint Action on Antimicrobial Resistance (AMR) and Healthcare-Associated Infections, an initiative has been launched to build the European AMR Surveillance network in veterinary medicine (EARS-Vet). So far, activities included mapping national systems for AMR surveillance in animal bacterial pathogens, and defining the EARS-Vet objectives, scope, and standards. Drawing on these milestones, this study aimed to pilot test EARS-Vet surveillance, namely to (i) assess available data, (ii) perform cross-country analyses, and (iii) identify potential challenges and develop recommendations to improve future data collection and analysis. METHODS: Eleven partners from nine EU/EEA countries participated and shared available data for the period 2016–2020, representing a total of 140,110 bacterial isolates and 1,302,389 entries (isolate-antibiotic agent combinations). RESULTS: Collected data were highly diverse and fragmented. Using a standardized approach and interpretation with epidemiological cut-offs, we were able to jointly analyze AMR trends of 53 combinations of animal host-bacteria–antibiotic categories of interest to EARS-Vet. This work demonstrated substantial variations of resistance levels, both among and within countries (e.g., between animal host species). DISCUSSION: Key issues at this stage include the lack of harmonization of antimicrobial susceptibility testing methods used in European surveillance systems and veterinary diagnostic laboratories, the absence of interpretation criteria for many bacteria–antibiotic combinations of interest, and the lack of data from a lot of EU/EEA countries where little or even surveillance currently exists. Still, this pilot study provides a proof-of-concept of what EARS-Vet can achieve. Results form an important basis to shape future systematic data collection and analysis.
format Online
Article
Text
id pubmed-10239921
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-102399212023-06-06 Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA Lagrange, Justine Amat, Jean-Philippe Ballesteros, Cristina Damborg, Peter Grönthal, Thomas Haenni, Marisa Jouy, Eric Kaspar, Heike Kenny, Kevin Klein, Babette Lupo, Agnese Madec, Jean-Yves Salomonsen, Charlotte Mark Müller, Elisabeth Madero, Cristina Muñoz Nilsson, Oskar Norström, Madelaine Nykäsenoja, Suvi Overesch, Gudrun Pedersen, Karl Pohjanvirta, Tarja Slowey, Rosemarie Justo, Cristiana Teixeira Urdahl, Anne Margrete Zafeiridis, Christos Zini, Eric Cazeau, Géraldine Jarrige, Nathalie Collineau, Lucie Front Microbiol Microbiology INTRODUCTION: As part of the EU Joint Action on Antimicrobial Resistance (AMR) and Healthcare-Associated Infections, an initiative has been launched to build the European AMR Surveillance network in veterinary medicine (EARS-Vet). So far, activities included mapping national systems for AMR surveillance in animal bacterial pathogens, and defining the EARS-Vet objectives, scope, and standards. Drawing on these milestones, this study aimed to pilot test EARS-Vet surveillance, namely to (i) assess available data, (ii) perform cross-country analyses, and (iii) identify potential challenges and develop recommendations to improve future data collection and analysis. METHODS: Eleven partners from nine EU/EEA countries participated and shared available data for the period 2016–2020, representing a total of 140,110 bacterial isolates and 1,302,389 entries (isolate-antibiotic agent combinations). RESULTS: Collected data were highly diverse and fragmented. Using a standardized approach and interpretation with epidemiological cut-offs, we were able to jointly analyze AMR trends of 53 combinations of animal host-bacteria–antibiotic categories of interest to EARS-Vet. This work demonstrated substantial variations of resistance levels, both among and within countries (e.g., between animal host species). DISCUSSION: Key issues at this stage include the lack of harmonization of antimicrobial susceptibility testing methods used in European surveillance systems and veterinary diagnostic laboratories, the absence of interpretation criteria for many bacteria–antibiotic combinations of interest, and the lack of data from a lot of EU/EEA countries where little or even surveillance currently exists. Still, this pilot study provides a proof-of-concept of what EARS-Vet can achieve. Results form an important basis to shape future systematic data collection and analysis. Frontiers Media S.A. 2023-05-22 /pmc/articles/PMC10239921/ /pubmed/37283921 http://dx.doi.org/10.3389/fmicb.2023.1188423 Text en Copyright © 2023 Lagrange, Amat, Ballesteros, Damborg, Grönthal, Haenni, Jouy, Kaspar, Kenny, Klein, Lupo, Madec, Salomonsen, Müller, Madero, Nilsson, Norström, Nykäsenoja, Overesch, Pedersen, Pohjanvirta, Slowey, Justo, Urdahl, Zafeiridis, Zini, Cazeau, Jarrige, Collineau and on behalf of the EARS-Vet network. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Lagrange, Justine
Amat, Jean-Philippe
Ballesteros, Cristina
Damborg, Peter
Grönthal, Thomas
Haenni, Marisa
Jouy, Eric
Kaspar, Heike
Kenny, Kevin
Klein, Babette
Lupo, Agnese
Madec, Jean-Yves
Salomonsen, Charlotte Mark
Müller, Elisabeth
Madero, Cristina Muñoz
Nilsson, Oskar
Norström, Madelaine
Nykäsenoja, Suvi
Overesch, Gudrun
Pedersen, Karl
Pohjanvirta, Tarja
Slowey, Rosemarie
Justo, Cristiana Teixeira
Urdahl, Anne Margrete
Zafeiridis, Christos
Zini, Eric
Cazeau, Géraldine
Jarrige, Nathalie
Collineau, Lucie
Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title_full Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title_fullStr Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title_full_unstemmed Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title_short Pilot testing the EARS-Vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the EU/EEA
title_sort pilot testing the ears-vet surveillance network for antibiotic resistance in bacterial pathogens from animals in the eu/eea
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10239921/
https://www.ncbi.nlm.nih.gov/pubmed/37283921
http://dx.doi.org/10.3389/fmicb.2023.1188423
work_keys_str_mv AT lagrangejustine pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT amatjeanphilippe pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT ballesteroscristina pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT damborgpeter pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT gronthalthomas pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT haennimarisa pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT jouyeric pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT kasparheike pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT kennykevin pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT kleinbabette pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT lupoagnese pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT madecjeanyves pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT salomonsencharlottemark pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT mullerelisabeth pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT maderocristinamunoz pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT nilssonoskar pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT norstrommadelaine pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT nykasenojasuvi pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT overeschgudrun pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT pedersenkarl pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT pohjanvirtatarja pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT sloweyrosemarie pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT justocristianateixeira pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT urdahlannemargrete pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT zafeiridischristos pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT zinieric pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT cazeaugeraldine pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT jarrigenathalie pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea
AT collineaulucie pilottestingtheearsvetsurveillancenetworkforantibioticresistanceinbacterialpathogensfromanimalsintheeueea