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To study the effect of ER flux with buffer on the neuronal calcium
Calcium signaling is decisive for cellular functions. This calcium random walk stipulates neuronal functions. Calcium concentration could provoke gene transcription, apoptosis, neuronal plasticity, etc. A malformation in calcium could change the neuron’s intracellular behavior. Calcium concentration...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10240135/ https://www.ncbi.nlm.nih.gov/pubmed/37304245 http://dx.doi.org/10.1140/epjp/s13360-023-04077-z |
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author | Vatsal, Vora Hardagna Jha, Brajesh Kumar Singh, Tajinder Pal |
author_facet | Vatsal, Vora Hardagna Jha, Brajesh Kumar Singh, Tajinder Pal |
author_sort | Vatsal, Vora Hardagna |
collection | PubMed |
description | Calcium signaling is decisive for cellular functions. This calcium random walk stipulates neuronal functions. Calcium concentration could provoke gene transcription, apoptosis, neuronal plasticity, etc. A malformation in calcium could change the neuron’s intracellular behavior. Calcium concentration balancing is a complex cellular mechanism. This occurrence can be handled with the Caputo fractional reaction–diffusion equation. In this mathematical modeling, we have included the STIM-Orai mechanism and Endoplasmic Reticulum (ER) flux, Inositol Triphosphate Receptor (IPR), SERCA, plasma membrane flux, voltage-gated calcium entry, and different buffer interactions. A hybrid integral transform and Green’s function approach were taken to solve the initial boundary problem. A closed-form solution of a Mittag-Leffler family function plotted using MATLAB software. Different parameters impact changes in the spatiotemporal behavior of the calcium concentration. Specific roles of organelles involved in Alzheimer’s disease-affected neurons are computed. Ethylene glycol tetraacetic acid (EGTA), 1,2-bis(o-aminophenoxy)ethane N,N,N,N-tetraacetic acid (BAPTA), and S100B protein effects are also observed. In all simulations, we can say S100B and the STIM-Orai effect cannot be neglected. This model lights up the different approaches for calcium signaling pathway simulation. As a consequence, we determine that a generalized reaction–diffusion approach is a better fit realistic model. |
format | Online Article Text |
id | pubmed-10240135 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-102401352023-06-06 To study the effect of ER flux with buffer on the neuronal calcium Vatsal, Vora Hardagna Jha, Brajesh Kumar Singh, Tajinder Pal Eur Phys J Plus Regular Article Calcium signaling is decisive for cellular functions. This calcium random walk stipulates neuronal functions. Calcium concentration could provoke gene transcription, apoptosis, neuronal plasticity, etc. A malformation in calcium could change the neuron’s intracellular behavior. Calcium concentration balancing is a complex cellular mechanism. This occurrence can be handled with the Caputo fractional reaction–diffusion equation. In this mathematical modeling, we have included the STIM-Orai mechanism and Endoplasmic Reticulum (ER) flux, Inositol Triphosphate Receptor (IPR), SERCA, plasma membrane flux, voltage-gated calcium entry, and different buffer interactions. A hybrid integral transform and Green’s function approach were taken to solve the initial boundary problem. A closed-form solution of a Mittag-Leffler family function plotted using MATLAB software. Different parameters impact changes in the spatiotemporal behavior of the calcium concentration. Specific roles of organelles involved in Alzheimer’s disease-affected neurons are computed. Ethylene glycol tetraacetic acid (EGTA), 1,2-bis(o-aminophenoxy)ethane N,N,N,N-tetraacetic acid (BAPTA), and S100B protein effects are also observed. In all simulations, we can say S100B and the STIM-Orai effect cannot be neglected. This model lights up the different approaches for calcium signaling pathway simulation. As a consequence, we determine that a generalized reaction–diffusion approach is a better fit realistic model. Springer Berlin Heidelberg 2023-06-05 2023 /pmc/articles/PMC10240135/ /pubmed/37304245 http://dx.doi.org/10.1140/epjp/s13360-023-04077-z Text en © The Author(s), under exclusive licence to Società Italiana di Fisica and Springer-Verlag GmbH Germany, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Regular Article Vatsal, Vora Hardagna Jha, Brajesh Kumar Singh, Tajinder Pal To study the effect of ER flux with buffer on the neuronal calcium |
title | To study the effect of ER flux with buffer on the neuronal calcium |
title_full | To study the effect of ER flux with buffer on the neuronal calcium |
title_fullStr | To study the effect of ER flux with buffer on the neuronal calcium |
title_full_unstemmed | To study the effect of ER flux with buffer on the neuronal calcium |
title_short | To study the effect of ER flux with buffer on the neuronal calcium |
title_sort | to study the effect of er flux with buffer on the neuronal calcium |
topic | Regular Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10240135/ https://www.ncbi.nlm.nih.gov/pubmed/37304245 http://dx.doi.org/10.1140/epjp/s13360-023-04077-z |
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