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Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models
Background: Acute kidney injury (AKI), with an increase in serum creatinine, is a common adverse drug event. Although various clinical studies have investigated whether a combination of two nephrotoxic drugs has an increased risk of AKI using traditional statistical models such as multivariable logi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10242015/ https://www.ncbi.nlm.nih.gov/pubmed/37288110 http://dx.doi.org/10.3389/fphar.2023.1176096 |
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author | Akimoto, Hayato Hayakawa, Takashi Nagashima, Takuya Minagawa, Kimino Takahashi, Yasuo Asai, Satoshi |
author_facet | Akimoto, Hayato Hayakawa, Takashi Nagashima, Takuya Minagawa, Kimino Takahashi, Yasuo Asai, Satoshi |
author_sort | Akimoto, Hayato |
collection | PubMed |
description | Background: Acute kidney injury (AKI), with an increase in serum creatinine, is a common adverse drug event. Although various clinical studies have investigated whether a combination of two nephrotoxic drugs has an increased risk of AKI using traditional statistical models such as multivariable logistic regression (MLR), the evaluation metrics have not been evaluated despite the fact that traditional statistical models may over-fit the data. The aim of the present study was to detect drug-drug interactions with an increased risk of AKI by interpreting machine-learning models to avoid overfitting. Methods: We developed six machine-learning models trained using electronic medical records: MLR, logistic least absolute shrinkage and selection operator regression (LLR), random forest, extreme gradient boosting (XGB) tree, and two support vector machine models (kernel = linear function and radial basis function). In order to detect drug-drug interactions, the XGB and LLR models that showed good predictive performance were interpreted by SHapley Additive exPlanations (SHAP) and relative excess risk due to interaction (RERI), respectively. Results: Among approximately 2.5 million patients, 65,667 patients were extracted from the electronic medical records, and assigned to case (N = 5,319) and control (N = 60,348) groups. In the XGB model, a combination of loop diuretic and histamine H(2) blocker [mean (|SHAP|) = 0.011] was identified as a relatively important risk factor for AKI. The combination of loop diuretic and H(2) blocker showed a significant synergistic interaction on an additive scale (RERI 1.289, 95% confidence interval 0.226–5.591) also in the LLR model. Conclusion: The present population-based case-control study using interpretable machine-learning models suggested that although the relative importance of the individual and combined effects of loop diuretics and H(2) blockers is lower than that of well-known risk factors such as older age and sex, concomitant use of a loop diuretic and histamine H(2) blocker is associated with increased risk of AKI. |
format | Online Article Text |
id | pubmed-10242015 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102420152023-06-07 Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models Akimoto, Hayato Hayakawa, Takashi Nagashima, Takuya Minagawa, Kimino Takahashi, Yasuo Asai, Satoshi Front Pharmacol Pharmacology Background: Acute kidney injury (AKI), with an increase in serum creatinine, is a common adverse drug event. Although various clinical studies have investigated whether a combination of two nephrotoxic drugs has an increased risk of AKI using traditional statistical models such as multivariable logistic regression (MLR), the evaluation metrics have not been evaluated despite the fact that traditional statistical models may over-fit the data. The aim of the present study was to detect drug-drug interactions with an increased risk of AKI by interpreting machine-learning models to avoid overfitting. Methods: We developed six machine-learning models trained using electronic medical records: MLR, logistic least absolute shrinkage and selection operator regression (LLR), random forest, extreme gradient boosting (XGB) tree, and two support vector machine models (kernel = linear function and radial basis function). In order to detect drug-drug interactions, the XGB and LLR models that showed good predictive performance were interpreted by SHapley Additive exPlanations (SHAP) and relative excess risk due to interaction (RERI), respectively. Results: Among approximately 2.5 million patients, 65,667 patients were extracted from the electronic medical records, and assigned to case (N = 5,319) and control (N = 60,348) groups. In the XGB model, a combination of loop diuretic and histamine H(2) blocker [mean (|SHAP|) = 0.011] was identified as a relatively important risk factor for AKI. The combination of loop diuretic and H(2) blocker showed a significant synergistic interaction on an additive scale (RERI 1.289, 95% confidence interval 0.226–5.591) also in the LLR model. Conclusion: The present population-based case-control study using interpretable machine-learning models suggested that although the relative importance of the individual and combined effects of loop diuretics and H(2) blockers is lower than that of well-known risk factors such as older age and sex, concomitant use of a loop diuretic and histamine H(2) blocker is associated with increased risk of AKI. Frontiers Media S.A. 2023-05-23 /pmc/articles/PMC10242015/ /pubmed/37288110 http://dx.doi.org/10.3389/fphar.2023.1176096 Text en Copyright © 2023 Akimoto, Hayakawa, Nagashima, Minagawa, Takahashi and Asai. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Pharmacology Akimoto, Hayato Hayakawa, Takashi Nagashima, Takuya Minagawa, Kimino Takahashi, Yasuo Asai, Satoshi Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title | Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title_full | Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title_fullStr | Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title_full_unstemmed | Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title_short | Detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
title_sort | detection of potential drug-drug interactions for risk of acute kidney injury: a population-based case-control study using interpretable machine-learning models |
topic | Pharmacology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10242015/ https://www.ncbi.nlm.nih.gov/pubmed/37288110 http://dx.doi.org/10.3389/fphar.2023.1176096 |
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