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Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer

[Image: see text] Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovar...

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Autores principales: Bifarin, Olatomiwa O., Sah, Samyukta, Gaul, David A., Moore, Samuel G., Chen, Ruihong, Palaniappan, Murugesan, Kim, Jaeyeon, Matzuk, Martin M., Fernández, Facundo M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10243112/
https://www.ncbi.nlm.nih.gov/pubmed/37220064
http://dx.doi.org/10.1021/acs.jproteome.3c00226
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author Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
author_facet Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
author_sort Bifarin, Olatomiwa O.
collection PubMed
description [Image: see text] Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovarian cancer deaths. However, very little is known about the metabolic course of this disease, particularly in its early stages. In this longitudinal study, we examined the temporal course of serum lipidome changes using a robust HGSC mouse model and machine learning data analysis. Early progression of HGSC was marked by increased levels of phosphatidylcholines and phosphatidylethanolamines. In contrast, later stages featured more diverse lipid alterations, including fatty acids and their derivatives, triglycerides, ceramides, hexosylceramides, sphingomyelins, lysophosphatidylcholines, and phosphatidylinositols. These alterations underscored unique perturbations in cell membrane stability, proliferation, and survival during cancer development and progression, offering potential targets for early detection and prognosis of human ovarian cancer.
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spelling pubmed-102431122023-06-07 Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer Bifarin, Olatomiwa O. Sah, Samyukta Gaul, David A. Moore, Samuel G. Chen, Ruihong Palaniappan, Murugesan Kim, Jaeyeon Matzuk, Martin M. Fernández, Facundo M. J Proteome Res [Image: see text] Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovarian cancer deaths. However, very little is known about the metabolic course of this disease, particularly in its early stages. In this longitudinal study, we examined the temporal course of serum lipidome changes using a robust HGSC mouse model and machine learning data analysis. Early progression of HGSC was marked by increased levels of phosphatidylcholines and phosphatidylethanolamines. In contrast, later stages featured more diverse lipid alterations, including fatty acids and their derivatives, triglycerides, ceramides, hexosylceramides, sphingomyelins, lysophosphatidylcholines, and phosphatidylinositols. These alterations underscored unique perturbations in cell membrane stability, proliferation, and survival during cancer development and progression, offering potential targets for early detection and prognosis of human ovarian cancer. American Chemical Society 2023-05-23 /pmc/articles/PMC10243112/ /pubmed/37220064 http://dx.doi.org/10.1021/acs.jproteome.3c00226 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_full Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_fullStr Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_full_unstemmed Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_short Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_sort machine learning reveals lipidome remodeling dynamics in a mouse model of ovarian cancer
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10243112/
https://www.ncbi.nlm.nih.gov/pubmed/37220064
http://dx.doi.org/10.1021/acs.jproteome.3c00226
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