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Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245351/ https://www.ncbi.nlm.nih.gov/pubmed/37287057 http://dx.doi.org/10.1186/s40246-023-00496-2 |
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author | Martinez-Diz, Silvia Morales-Álvarez, Carmen Maria Garcia-Iglesias, Yarmila Guerrero-González, Juan Miguel Romero-Cachinero, Catalina González-Cabezuelo, Jose María Fernandez-Rosado, Francisco Javier Arenas-Rodríguez, Verónica Lopez-Cintas, Rocío Alvarez-Cubero, Maria Jesús Martinez-Gonzalez, Luis Javier |
author_facet | Martinez-Diz, Silvia Morales-Álvarez, Carmen Maria Garcia-Iglesias, Yarmila Guerrero-González, Juan Miguel Romero-Cachinero, Catalina González-Cabezuelo, Jose María Fernandez-Rosado, Francisco Javier Arenas-Rodríguez, Verónica Lopez-Cintas, Rocío Alvarez-Cubero, Maria Jesús Martinez-Gonzalez, Luis Javier |
author_sort | Martinez-Diz, Silvia |
collection | PubMed |
description | BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the disease. Here we characterize the role of ACE2, AR, MX1, ERG, ETV5 and TMPRSS2 for trying a better classification of COVID-19 through knowledge of the disease mechanisms. METHODS: A total of 329 blood samples were genotyped in ACE2, MX1 and TMPRSS2. RNA analyses were also performed from 258 available samples using quantitative polymerase chain reaction for genes: ERG, ETV5, AR, MX1, ACE2, and TMPRSS2. Moreover, in silico analysis variant effect predictor, ClinVar, IPA, DAVID, GTEx, STRING and miRDB database was also performed. Clinical and demographic data were recruited from all participants following WHO classification criteria. RESULTS: We confirm the use of ferritin (p < 0.001), D-dimer (p < 0.010), CRP (p < 0.001) and LDH (p < 0.001) as markers for distinguishing mild and severe cohorts. Expression studies showed that MX1 and AR are significantly higher expressed in mild vs severe patients (p < 0.05). ACE2 and TMPRSS2 are involved in the same molecular process of membrane fusion (p = 4.4 × 10(–3)), acting as proteases (p = 0.047). CONCLUSIONS: In addition to the key role of TMPSRSS2, we reported for the first time that higher expression levels of AR are related with a decreased risk of severe COVID-19 disease in females. Moreover, functional analysis demonstrates that ACE2, MX1 and TMPRSS2 are relevant markers in this disease. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40246-023-00496-2. |
format | Online Article Text |
id | pubmed-10245351 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-102453512023-06-08 Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity Martinez-Diz, Silvia Morales-Álvarez, Carmen Maria Garcia-Iglesias, Yarmila Guerrero-González, Juan Miguel Romero-Cachinero, Catalina González-Cabezuelo, Jose María Fernandez-Rosado, Francisco Javier Arenas-Rodríguez, Verónica Lopez-Cintas, Rocío Alvarez-Cubero, Maria Jesús Martinez-Gonzalez, Luis Javier Hum Genomics Research BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the disease. Here we characterize the role of ACE2, AR, MX1, ERG, ETV5 and TMPRSS2 for trying a better classification of COVID-19 through knowledge of the disease mechanisms. METHODS: A total of 329 blood samples were genotyped in ACE2, MX1 and TMPRSS2. RNA analyses were also performed from 258 available samples using quantitative polymerase chain reaction for genes: ERG, ETV5, AR, MX1, ACE2, and TMPRSS2. Moreover, in silico analysis variant effect predictor, ClinVar, IPA, DAVID, GTEx, STRING and miRDB database was also performed. Clinical and demographic data were recruited from all participants following WHO classification criteria. RESULTS: We confirm the use of ferritin (p < 0.001), D-dimer (p < 0.010), CRP (p < 0.001) and LDH (p < 0.001) as markers for distinguishing mild and severe cohorts. Expression studies showed that MX1 and AR are significantly higher expressed in mild vs severe patients (p < 0.05). ACE2 and TMPRSS2 are involved in the same molecular process of membrane fusion (p = 4.4 × 10(–3)), acting as proteases (p = 0.047). CONCLUSIONS: In addition to the key role of TMPSRSS2, we reported for the first time that higher expression levels of AR are related with a decreased risk of severe COVID-19 disease in females. Moreover, functional analysis demonstrates that ACE2, MX1 and TMPRSS2 are relevant markers in this disease. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40246-023-00496-2. BioMed Central 2023-06-07 /pmc/articles/PMC10245351/ /pubmed/37287057 http://dx.doi.org/10.1186/s40246-023-00496-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Martinez-Diz, Silvia Morales-Álvarez, Carmen Maria Garcia-Iglesias, Yarmila Guerrero-González, Juan Miguel Romero-Cachinero, Catalina González-Cabezuelo, Jose María Fernandez-Rosado, Francisco Javier Arenas-Rodríguez, Verónica Lopez-Cintas, Rocío Alvarez-Cubero, Maria Jesús Martinez-Gonzalez, Luis Javier Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title | Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title_full | Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title_fullStr | Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title_full_unstemmed | Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title_short | Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity |
title_sort | analyzing the role of ace2, ar, mx1 and tmprss2 genetic markers for covid-19 severity |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245351/ https://www.ncbi.nlm.nih.gov/pubmed/37287057 http://dx.doi.org/10.1186/s40246-023-00496-2 |
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