Cargando…

Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity

BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the...

Descripción completa

Detalles Bibliográficos
Autores principales: Martinez-Diz, Silvia, Morales-Álvarez, Carmen Maria, Garcia-Iglesias, Yarmila, Guerrero-González, Juan Miguel, Romero-Cachinero, Catalina, González-Cabezuelo, Jose María, Fernandez-Rosado, Francisco Javier, Arenas-Rodríguez, Verónica, Lopez-Cintas, Rocío, Alvarez-Cubero, Maria Jesús, Martinez-Gonzalez, Luis Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245351/
https://www.ncbi.nlm.nih.gov/pubmed/37287057
http://dx.doi.org/10.1186/s40246-023-00496-2
_version_ 1785054847220842496
author Martinez-Diz, Silvia
Morales-Álvarez, Carmen Maria
Garcia-Iglesias, Yarmila
Guerrero-González, Juan Miguel
Romero-Cachinero, Catalina
González-Cabezuelo, Jose María
Fernandez-Rosado, Francisco Javier
Arenas-Rodríguez, Verónica
Lopez-Cintas, Rocío
Alvarez-Cubero, Maria Jesús
Martinez-Gonzalez, Luis Javier
author_facet Martinez-Diz, Silvia
Morales-Álvarez, Carmen Maria
Garcia-Iglesias, Yarmila
Guerrero-González, Juan Miguel
Romero-Cachinero, Catalina
González-Cabezuelo, Jose María
Fernandez-Rosado, Francisco Javier
Arenas-Rodríguez, Verónica
Lopez-Cintas, Rocío
Alvarez-Cubero, Maria Jesús
Martinez-Gonzalez, Luis Javier
author_sort Martinez-Diz, Silvia
collection PubMed
description BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the disease. Here we characterize the role of ACE2, AR, MX1, ERG, ETV5 and TMPRSS2 for trying a better classification of COVID-19 through knowledge of the disease mechanisms. METHODS: A total of 329 blood samples were genotyped in ACE2, MX1 and TMPRSS2. RNA analyses were also performed from 258 available samples using quantitative polymerase chain reaction for genes: ERG, ETV5, AR, MX1, ACE2, and TMPRSS2. Moreover, in silico analysis variant effect predictor, ClinVar, IPA, DAVID, GTEx, STRING and miRDB database was also performed. Clinical and demographic data were recruited from all participants following WHO classification criteria. RESULTS: We confirm the use of ferritin (p < 0.001), D-dimer (p < 0.010), CRP (p < 0.001) and LDH (p < 0.001) as markers for distinguishing mild and severe cohorts. Expression studies showed that MX1 and AR are significantly higher expressed in mild vs severe patients (p < 0.05). ACE2 and TMPRSS2 are involved in the same molecular process of membrane fusion (p = 4.4 × 10(–3)), acting as proteases (p = 0.047). CONCLUSIONS: In addition to the key role of TMPSRSS2, we reported for the first time that higher expression levels of AR are related with a decreased risk of severe COVID-19 disease in females. Moreover, functional analysis demonstrates that ACE2, MX1 and TMPRSS2 are relevant markers in this disease. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40246-023-00496-2.
format Online
Article
Text
id pubmed-10245351
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-102453512023-06-08 Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity Martinez-Diz, Silvia Morales-Álvarez, Carmen Maria Garcia-Iglesias, Yarmila Guerrero-González, Juan Miguel Romero-Cachinero, Catalina González-Cabezuelo, Jose María Fernandez-Rosado, Francisco Javier Arenas-Rodríguez, Verónica Lopez-Cintas, Rocío Alvarez-Cubero, Maria Jesús Martinez-Gonzalez, Luis Javier Hum Genomics Research BACKGROUND: The use of molecular biomarkers for COVID-19 remains unconclusive. The application of a molecular biomarker in combination with clinical ones that could help classifying aggressive patients in first steps of the disease could help clinician and sanitary system a better management of the disease. Here we characterize the role of ACE2, AR, MX1, ERG, ETV5 and TMPRSS2 for trying a better classification of COVID-19 through knowledge of the disease mechanisms. METHODS: A total of 329 blood samples were genotyped in ACE2, MX1 and TMPRSS2. RNA analyses were also performed from 258 available samples using quantitative polymerase chain reaction for genes: ERG, ETV5, AR, MX1, ACE2, and TMPRSS2. Moreover, in silico analysis variant effect predictor, ClinVar, IPA, DAVID, GTEx, STRING and miRDB database was also performed. Clinical and demographic data were recruited from all participants following WHO classification criteria. RESULTS: We confirm the use of ferritin (p < 0.001), D-dimer (p < 0.010), CRP (p < 0.001) and LDH (p < 0.001) as markers for distinguishing mild and severe cohorts. Expression studies showed that MX1 and AR are significantly higher expressed in mild vs severe patients (p < 0.05). ACE2 and TMPRSS2 are involved in the same molecular process of membrane fusion (p = 4.4 × 10(–3)), acting as proteases (p = 0.047). CONCLUSIONS: In addition to the key role of TMPSRSS2, we reported for the first time that higher expression levels of AR are related with a decreased risk of severe COVID-19 disease in females. Moreover, functional analysis demonstrates that ACE2, MX1 and TMPRSS2 are relevant markers in this disease. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40246-023-00496-2. BioMed Central 2023-06-07 /pmc/articles/PMC10245351/ /pubmed/37287057 http://dx.doi.org/10.1186/s40246-023-00496-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Martinez-Diz, Silvia
Morales-Álvarez, Carmen Maria
Garcia-Iglesias, Yarmila
Guerrero-González, Juan Miguel
Romero-Cachinero, Catalina
González-Cabezuelo, Jose María
Fernandez-Rosado, Francisco Javier
Arenas-Rodríguez, Verónica
Lopez-Cintas, Rocío
Alvarez-Cubero, Maria Jesús
Martinez-Gonzalez, Luis Javier
Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title_full Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title_fullStr Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title_full_unstemmed Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title_short Analyzing the role of ACE2, AR, MX1 and TMPRSS2 genetic markers for COVID-19 severity
title_sort analyzing the role of ace2, ar, mx1 and tmprss2 genetic markers for covid-19 severity
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245351/
https://www.ncbi.nlm.nih.gov/pubmed/37287057
http://dx.doi.org/10.1186/s40246-023-00496-2
work_keys_str_mv AT martinezdizsilvia analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT moralesalvarezcarmenmaria analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT garciaiglesiasyarmila analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT guerrerogonzalezjuanmiguel analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT romerocachinerocatalina analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT gonzalezcabezuelojosemaria analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT fernandezrosadofranciscojavier analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT arenasrodriguezveronica analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT lopezcintasrocio analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT alvarezcuberomariajesus analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity
AT martinezgonzalezluisjavier analyzingtheroleoface2armx1andtmprss2geneticmarkersforcovid19severity