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Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer

Energy landscapes can provide intuitive depictions of population heterogeneity and dynamics. However, it is unclear whether individual cell behavior, hypothesized to be determined by initial position and noise, is faithfully recapitulated. Using the p21-/Cdk2-dependent quiescence-proliferation decis...

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Autores principales: Venkatachalapathy, Harish, Brzakala, Cole, Batchelor, Eric, Azarin, Samira M., Sarkar, Casim A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245870/
https://www.ncbi.nlm.nih.gov/pubmed/37292599
http://dx.doi.org/10.1101/2023.05.22.541793
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author Venkatachalapathy, Harish
Brzakala, Cole
Batchelor, Eric
Azarin, Samira M.
Sarkar, Casim A.
author_facet Venkatachalapathy, Harish
Brzakala, Cole
Batchelor, Eric
Azarin, Samira M.
Sarkar, Casim A.
author_sort Venkatachalapathy, Harish
collection PubMed
description Energy landscapes can provide intuitive depictions of population heterogeneity and dynamics. However, it is unclear whether individual cell behavior, hypothesized to be determined by initial position and noise, is faithfully recapitulated. Using the p21-/Cdk2-dependent quiescence-proliferation decision in breast cancer dormancy as a testbed, we examined single-cell dynamics on the landscape when perturbed by hypoxia, a dormancy-inducing stress. Combining trajectory-based energy landscape generation with single-cell time-lapse microscopy, we found that initial position on a p21/Cdk2 landscape did not fully explain the observed cell-fate heterogeneity under hypoxia. Instead, cells with higher cell state velocities prior to hypoxia, influenced by epigenetic parameters, tended to remain proliferative under hypoxia. Thus, the fate decision on this landscape is significantly influenced by “inertia”, a velocity-dependent ability to resist directional changes despite reshaping of the underlying landscape, superseding positional effects. Such inertial effects may markedly influence cell-fate trajectories in tumors and other dynamically changing microenvironments.
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spelling pubmed-102458702023-06-08 Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer Venkatachalapathy, Harish Brzakala, Cole Batchelor, Eric Azarin, Samira M. Sarkar, Casim A. bioRxiv Article Energy landscapes can provide intuitive depictions of population heterogeneity and dynamics. However, it is unclear whether individual cell behavior, hypothesized to be determined by initial position and noise, is faithfully recapitulated. Using the p21-/Cdk2-dependent quiescence-proliferation decision in breast cancer dormancy as a testbed, we examined single-cell dynamics on the landscape when perturbed by hypoxia, a dormancy-inducing stress. Combining trajectory-based energy landscape generation with single-cell time-lapse microscopy, we found that initial position on a p21/Cdk2 landscape did not fully explain the observed cell-fate heterogeneity under hypoxia. Instead, cells with higher cell state velocities prior to hypoxia, influenced by epigenetic parameters, tended to remain proliferative under hypoxia. Thus, the fate decision on this landscape is significantly influenced by “inertia”, a velocity-dependent ability to resist directional changes despite reshaping of the underlying landscape, superseding positional effects. Such inertial effects may markedly influence cell-fate trajectories in tumors and other dynamically changing microenvironments. Cold Spring Harbor Laboratory 2023-05-24 /pmc/articles/PMC10245870/ /pubmed/37292599 http://dx.doi.org/10.1101/2023.05.22.541793 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Venkatachalapathy, Harish
Brzakala, Cole
Batchelor, Eric
Azarin, Samira M.
Sarkar, Casim A.
Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title_full Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title_fullStr Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title_full_unstemmed Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title_short Inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
title_sort inertial effect of cell state velocity on the quiescence-proliferation fate decision in breast cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10245870/
https://www.ncbi.nlm.nih.gov/pubmed/37292599
http://dx.doi.org/10.1101/2023.05.22.541793
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