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Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species
Bamboo species have traditionally been used as building material and potential source of bioactive substances, as they produce a wide variety of phenolic compounds, including flavonoids and cinnamic acid derivatives that are considered biologically active. However, the effects of growth conditions s...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10246775/ https://www.ncbi.nlm.nih.gov/pubmed/37293555 http://dx.doi.org/10.3389/fmolb.2023.1192088 |
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author | Chitiva, Luis Carlos Lozano-Puentes, Hair Santiago Londoño, Ximena Leão, Tiago F. Cala, Mónica P. Ruiz-Sanchez, Eduardo Díaz-Ariza, Lucía Ana Prieto-Rodríguez, Juliet A. Castro-Gamboa, Ian Costa, Geison M. |
author_facet | Chitiva, Luis Carlos Lozano-Puentes, Hair Santiago Londoño, Ximena Leão, Tiago F. Cala, Mónica P. Ruiz-Sanchez, Eduardo Díaz-Ariza, Lucía Ana Prieto-Rodríguez, Juliet A. Castro-Gamboa, Ian Costa, Geison M. |
author_sort | Chitiva, Luis Carlos |
collection | PubMed |
description | Bamboo species have traditionally been used as building material and potential source of bioactive substances, as they produce a wide variety of phenolic compounds, including flavonoids and cinnamic acid derivatives that are considered biologically active. However, the effects of growth conditions such as location, altitude, climate, and soil on the metabolome of these species still need to be fully understood. This study aimed to evaluate variations in chemical composition induced by altitudinal gradient (0–3000 m) by utilizing an untargeted metabolomics approach and mapping chemical space using molecular networking analysis. We analyzed 111 samples from 12 bamboo species collected from different altitudinal ranges using liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (LC-QTOF-MS). We used multivariate and univariate statistical analyses to identify the metabolites that showed significant differences in the altitude environments. Additionally, we used the Global Natural Products Social Molecular Networking (GNPS) web platform to perform chemical mapping by comparing the metabolome among the studied species and the reference spectra from its database. The results showed 89 differential metabolites between the altitudinal ranges investigated, wherein high altitude environments significantly increased the profile of flavonoids. While, low altitude environments significantly boosted the profile of cinnamic acid derivatives, particularly caffeoylquinic acids (CQAs). MolNetEnhancer networks confirmed the same differential molecular families already found, revealing metabolic diversity. Overall, this study provides the first report of variations induced by altitude in the chemical profile of bamboo species. The findings may possess fascinating active biological properties, thus offering an alternative use for bamboo. |
format | Online Article Text |
id | pubmed-10246775 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102467752023-06-08 Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species Chitiva, Luis Carlos Lozano-Puentes, Hair Santiago Londoño, Ximena Leão, Tiago F. Cala, Mónica P. Ruiz-Sanchez, Eduardo Díaz-Ariza, Lucía Ana Prieto-Rodríguez, Juliet A. Castro-Gamboa, Ian Costa, Geison M. Front Mol Biosci Molecular Biosciences Bamboo species have traditionally been used as building material and potential source of bioactive substances, as they produce a wide variety of phenolic compounds, including flavonoids and cinnamic acid derivatives that are considered biologically active. However, the effects of growth conditions such as location, altitude, climate, and soil on the metabolome of these species still need to be fully understood. This study aimed to evaluate variations in chemical composition induced by altitudinal gradient (0–3000 m) by utilizing an untargeted metabolomics approach and mapping chemical space using molecular networking analysis. We analyzed 111 samples from 12 bamboo species collected from different altitudinal ranges using liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (LC-QTOF-MS). We used multivariate and univariate statistical analyses to identify the metabolites that showed significant differences in the altitude environments. Additionally, we used the Global Natural Products Social Molecular Networking (GNPS) web platform to perform chemical mapping by comparing the metabolome among the studied species and the reference spectra from its database. The results showed 89 differential metabolites between the altitudinal ranges investigated, wherein high altitude environments significantly increased the profile of flavonoids. While, low altitude environments significantly boosted the profile of cinnamic acid derivatives, particularly caffeoylquinic acids (CQAs). MolNetEnhancer networks confirmed the same differential molecular families already found, revealing metabolic diversity. Overall, this study provides the first report of variations induced by altitude in the chemical profile of bamboo species. The findings may possess fascinating active biological properties, thus offering an alternative use for bamboo. Frontiers Media S.A. 2023-05-24 /pmc/articles/PMC10246775/ /pubmed/37293555 http://dx.doi.org/10.3389/fmolb.2023.1192088 Text en Copyright © 2023 Chitiva, Lozano-Puentes, Londoño, Leão, Cala, Ruiz-Sanchez, Díaz-Ariza, Prieto-Rodríguez, Castro-Gamboa and Costa. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Chitiva, Luis Carlos Lozano-Puentes, Hair Santiago Londoño, Ximena Leão, Tiago F. Cala, Mónica P. Ruiz-Sanchez, Eduardo Díaz-Ariza, Lucía Ana Prieto-Rodríguez, Juliet A. Castro-Gamboa, Ian Costa, Geison M. Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title | Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title_full | Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title_fullStr | Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title_full_unstemmed | Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title_short | Untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
title_sort | untargeted metabolomics approach and molecular networking analysis reveal changes in chemical composition under the influence of altitudinal variation in bamboo species |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10246775/ https://www.ncbi.nlm.nih.gov/pubmed/37293555 http://dx.doi.org/10.3389/fmolb.2023.1192088 |
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