Cargando…

Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic

Many functionally promiscuous plant 2,3-oxidosqualene cyclases (OSCs) have been found, but complete functional reshaping is rarely reported. In this study, we have identified two new plant OSCs: a unique protostadienol synthase (AoPDS) and a common cycloartenol synthase (AoCAS) from Alisma orientale...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Fan, Wang, Yunpeng, Yue, Jingyang, Zhang, Rongrong, Hu, Yong-er, Huang, Ruoshi, Ji, Ai-jia, Hess, B. Andes, Liu, Zhongqiu, Duan, Lixin, Wu, Ruibo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10246894/
https://www.ncbi.nlm.nih.gov/pubmed/37285431
http://dx.doi.org/10.1126/sciadv.adh1418
_version_ 1785055125964849152
author Zhang, Fan
Wang, Yunpeng
Yue, Jingyang
Zhang, Rongrong
Hu, Yong-er
Huang, Ruoshi
Ji, Ai-jia
Hess, B. Andes
Liu, Zhongqiu
Duan, Lixin
Wu, Ruibo
author_facet Zhang, Fan
Wang, Yunpeng
Yue, Jingyang
Zhang, Rongrong
Hu, Yong-er
Huang, Ruoshi
Ji, Ai-jia
Hess, B. Andes
Liu, Zhongqiu
Duan, Lixin
Wu, Ruibo
author_sort Zhang, Fan
collection PubMed
description Many functionally promiscuous plant 2,3-oxidosqualene cyclases (OSCs) have been found, but complete functional reshaping is rarely reported. In this study, we have identified two new plant OSCs: a unique protostadienol synthase (AoPDS) and a common cycloartenol synthase (AoCAS) from Alisma orientale (Sam.) Juzep. Multiscale simulations and mutagenesis experiments revealed that threonine-727 is an essential residue responsible for protosta-13 (17),24-dienol biosynthesis in AoPDS and that the F726T mutant completely reshapes the native function of AoCAS into a PDS function to yield almost exclusively protosta-13 (17),24-dienol. Unexpectedly, various native functions were uniformly reshaped into a PDS function by introducing the phenylalanine → threonine substitution at this conserved position in other plant and non-plant chair-boat-chair–type OSCs. Further computational modeling elaborated the trade-off mechanisms of the phenylalanine → threonine substitution that leads to the PDS activity. This study demonstrates a general strategy for functional reshaping by using a plastic residue based on the decipherment of the catalytic mechanism.
format Online
Article
Text
id pubmed-10246894
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Association for the Advancement of Science
record_format MEDLINE/PubMed
spelling pubmed-102468942023-06-08 Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic Zhang, Fan Wang, Yunpeng Yue, Jingyang Zhang, Rongrong Hu, Yong-er Huang, Ruoshi Ji, Ai-jia Hess, B. Andes Liu, Zhongqiu Duan, Lixin Wu, Ruibo Sci Adv Biomedicine and Life Sciences Many functionally promiscuous plant 2,3-oxidosqualene cyclases (OSCs) have been found, but complete functional reshaping is rarely reported. In this study, we have identified two new plant OSCs: a unique protostadienol synthase (AoPDS) and a common cycloartenol synthase (AoCAS) from Alisma orientale (Sam.) Juzep. Multiscale simulations and mutagenesis experiments revealed that threonine-727 is an essential residue responsible for protosta-13 (17),24-dienol biosynthesis in AoPDS and that the F726T mutant completely reshapes the native function of AoCAS into a PDS function to yield almost exclusively protosta-13 (17),24-dienol. Unexpectedly, various native functions were uniformly reshaped into a PDS function by introducing the phenylalanine → threonine substitution at this conserved position in other plant and non-plant chair-boat-chair–type OSCs. Further computational modeling elaborated the trade-off mechanisms of the phenylalanine → threonine substitution that leads to the PDS activity. This study demonstrates a general strategy for functional reshaping by using a plastic residue based on the decipherment of the catalytic mechanism. American Association for the Advancement of Science 2023-06-07 /pmc/articles/PMC10246894/ /pubmed/37285431 http://dx.doi.org/10.1126/sciadv.adh1418 Text en Copyright © 2023 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Zhang, Fan
Wang, Yunpeng
Yue, Jingyang
Zhang, Rongrong
Hu, Yong-er
Huang, Ruoshi
Ji, Ai-jia
Hess, B. Andes
Liu, Zhongqiu
Duan, Lixin
Wu, Ruibo
Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title_full Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title_fullStr Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title_full_unstemmed Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title_short Discovering a uniform functional trade-off of the CBC-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
title_sort discovering a uniform functional trade-off of the cbc-type 2,3-oxidosqualene cyclases and deciphering its chemical logic
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10246894/
https://www.ncbi.nlm.nih.gov/pubmed/37285431
http://dx.doi.org/10.1126/sciadv.adh1418
work_keys_str_mv AT zhangfan discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT wangyunpeng discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT yuejingyang discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT zhangrongrong discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT huyonger discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT huangruoshi discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT jiaijia discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT hessbandes discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT liuzhongqiu discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT duanlixin discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic
AT wuruibo discoveringauniformfunctionaltradeoffofthecbctype23oxidosqualenecyclasesanddecipheringitschemicallogic