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Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating
The paper deals with two interrelated topics: (1) identifying transient amplifiers in an iterative process, and (2) analyzing the process by its spectral dynamics, which is the change in the graph spectra by edge manipulation. Transient amplifiers are networks representing population structures whic...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247861/ https://www.ncbi.nlm.nih.gov/pubmed/37284903 http://dx.doi.org/10.1007/s00285-023-01937-1 |
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author | Richter, Hendrik |
author_facet | Richter, Hendrik |
author_sort | Richter, Hendrik |
collection | PubMed |
description | The paper deals with two interrelated topics: (1) identifying transient amplifiers in an iterative process, and (2) analyzing the process by its spectral dynamics, which is the change in the graph spectra by edge manipulation. Transient amplifiers are networks representing population structures which shift the balance between natural selection and random drift. Thus, amplifiers are highly relevant for understanding the relationships between spatial structures and evolutionary dynamics. We study an iterative procedure to identify transient amplifiers for death–Birth updating. The algorithm starts with a regular input graph and iteratively removes edges until desired structures are achieved. Thus, a sequence of candidate graphs is obtained. The edge removals are guided by quantities derived from the sequence of candidate graphs. Moreover, we are interested in the Laplacian spectra of the candidate graphs and analyze the iterative process by its spectral dynamics. The results show that although transient amplifiers for death–Birth updating are generally rare, a substantial number of them can be obtained by the proposed procedure. The graphs identified share structural properties and have some similarity to dumbbell and barbell graphs. We analyze amplification properties of these graphs and also two more families of bell-like graphs and show that further transient amplifiers for death–Birth updating can be found. Finally, it is demonstrated that the spectral dynamics possesses characteristic features useful for deducing links between structural and spectral properties. These feature can also be taken for distinguishing transient amplifiers among evolutionary graphs in general. |
format | Online Article Text |
id | pubmed-10247861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-102478612023-06-09 Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating Richter, Hendrik J Math Biol Article The paper deals with two interrelated topics: (1) identifying transient amplifiers in an iterative process, and (2) analyzing the process by its spectral dynamics, which is the change in the graph spectra by edge manipulation. Transient amplifiers are networks representing population structures which shift the balance between natural selection and random drift. Thus, amplifiers are highly relevant for understanding the relationships between spatial structures and evolutionary dynamics. We study an iterative procedure to identify transient amplifiers for death–Birth updating. The algorithm starts with a regular input graph and iteratively removes edges until desired structures are achieved. Thus, a sequence of candidate graphs is obtained. The edge removals are guided by quantities derived from the sequence of candidate graphs. Moreover, we are interested in the Laplacian spectra of the candidate graphs and analyze the iterative process by its spectral dynamics. The results show that although transient amplifiers for death–Birth updating are generally rare, a substantial number of them can be obtained by the proposed procedure. The graphs identified share structural properties and have some similarity to dumbbell and barbell graphs. We analyze amplification properties of these graphs and also two more families of bell-like graphs and show that further transient amplifiers for death–Birth updating can be found. Finally, it is demonstrated that the spectral dynamics possesses characteristic features useful for deducing links between structural and spectral properties. These feature can also be taken for distinguishing transient amplifiers among evolutionary graphs in general. Springer Berlin Heidelberg 2023-06-07 2023 /pmc/articles/PMC10247861/ /pubmed/37284903 http://dx.doi.org/10.1007/s00285-023-01937-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Richter, Hendrik Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title | Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title_full | Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title_fullStr | Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title_full_unstemmed | Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title_short | Spectral dynamics of guided edge removals and identifying transient amplifiers for death–Birth updating |
title_sort | spectral dynamics of guided edge removals and identifying transient amplifiers for death–birth updating |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247861/ https://www.ncbi.nlm.nih.gov/pubmed/37284903 http://dx.doi.org/10.1007/s00285-023-01937-1 |
work_keys_str_mv | AT richterhendrik spectraldynamicsofguidededgeremovalsandidentifyingtransientamplifiersfordeathbirthupdating |