A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling

Inspired by the production of reference data sets in the Genome in a Bottle project, we sequenced one Charolais heifer with different technologies: Illumina paired-end, Oxford Nanopore, Pacific Biosciences (HiFi and CLR), 10X Genomics linked-reads, and Hi-C. In order to generate haplotypic assemblie...

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Detalles Bibliográficos
Autores principales: Eché, Camille, Iampietro, Carole, Birbes, Clément, Dréau, Andreea, Kuchly, Claire, Di Franco, Arnaud, Klopp, Christophe, Faraut, Thomas, Djebali, Sarah, Castinel, Adrien, Zytnicki, Matthias, Denis, Erwan, Boussaha, Mekki, Grohs, Cécile, Boichard, Didier, Gaspin, Christine, Milan, Denis, Donnadieu, Cécile
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Data Descriptor
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10250393/
https://www.ncbi.nlm.nih.gov/pubmed/37291142
http://dx.doi.org/10.1038/s41597-023-02249-1

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