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Genetic analysis of dystonia-related genes in Parkinson's disease
OBJECTIVE: Parkinson's disease (PD) and dystonia are two closely related movement disorders with overlaps in clinical phenotype. Variants in several dystonia-related genes were demonstrated to be associated with PD; however, genetic evidence for the involvement of dystonia-related genes in PD h...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10250656/ https://www.ncbi.nlm.nih.gov/pubmed/37304079 http://dx.doi.org/10.3389/fnagi.2023.1207114 |
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author | Wang, Yige Zhao, Yuwen Pan, Hongxu Zeng, Qian Zhou, Xiaoxia Xiang, Yaqin Zhou, Zhou Xu, Qian Sun, Qiying Tan, Jieqiong Yan, Xinxiang Li, Jinchen Guo, Jifeng Tang, Beisha Yu, Qiao Liu, Zhenhua |
author_facet | Wang, Yige Zhao, Yuwen Pan, Hongxu Zeng, Qian Zhou, Xiaoxia Xiang, Yaqin Zhou, Zhou Xu, Qian Sun, Qiying Tan, Jieqiong Yan, Xinxiang Li, Jinchen Guo, Jifeng Tang, Beisha Yu, Qiao Liu, Zhenhua |
author_sort | Wang, Yige |
collection | PubMed |
description | OBJECTIVE: Parkinson's disease (PD) and dystonia are two closely related movement disorders with overlaps in clinical phenotype. Variants in several dystonia-related genes were demonstrated to be associated with PD; however, genetic evidence for the involvement of dystonia-related genes in PD has not been fully studied. Here, we comprehensively investigated the association between rare variants in dystonia-related genes and PD in a large Chinese cohort. METHODS: We comprehensively analyzed the rare variants of 47 known dystonia-related genes by mining the whole-exome sequencing (WES) and whole-genome sequencing (WGS) data from 3,959 PD patients and 2,931 healthy controls. We initially identified potentially pathogenic variants of dystonia-related genes in patients with PD based on different inheritance models. Sequence kernel association tests were conducted in the next step to detect the association between the burden of rare variants and the risk for PD. RESULTS: We found that five patients with PD carried potentially pathogenic biallelic variants in recessive dystonia-related genes including COL6A3 and TH. Additionally, we identified 180 deleterious variants in dominant dystonia-related genes based on computational pathogenicity predictions and four of which were considered as potentially pathogenic variants (p.W591X and p.G820S in ANO3, p.R678H in ADCY5, and p.R458Q in SLC2A1). A gene-based burden analysis revealed the increased burden of variant subgroups of TH, SQSTM1, THAP1, and ADCY5 in sporadic early-onset PD, whereas COL6A3 was associated with sporadic late-onset PD. However, none of them reached statistical significance after the Bonferroni correction. CONCLUSION: Our findings indicated that rare variants in several dystonia-related genes are suggestively associated with PD, and taken together, the role of COL6A3 and TH genes in PD is highlighted. |
format | Online Article Text |
id | pubmed-10250656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102506562023-06-10 Genetic analysis of dystonia-related genes in Parkinson's disease Wang, Yige Zhao, Yuwen Pan, Hongxu Zeng, Qian Zhou, Xiaoxia Xiang, Yaqin Zhou, Zhou Xu, Qian Sun, Qiying Tan, Jieqiong Yan, Xinxiang Li, Jinchen Guo, Jifeng Tang, Beisha Yu, Qiao Liu, Zhenhua Front Aging Neurosci Aging Neuroscience OBJECTIVE: Parkinson's disease (PD) and dystonia are two closely related movement disorders with overlaps in clinical phenotype. Variants in several dystonia-related genes were demonstrated to be associated with PD; however, genetic evidence for the involvement of dystonia-related genes in PD has not been fully studied. Here, we comprehensively investigated the association between rare variants in dystonia-related genes and PD in a large Chinese cohort. METHODS: We comprehensively analyzed the rare variants of 47 known dystonia-related genes by mining the whole-exome sequencing (WES) and whole-genome sequencing (WGS) data from 3,959 PD patients and 2,931 healthy controls. We initially identified potentially pathogenic variants of dystonia-related genes in patients with PD based on different inheritance models. Sequence kernel association tests were conducted in the next step to detect the association between the burden of rare variants and the risk for PD. RESULTS: We found that five patients with PD carried potentially pathogenic biallelic variants in recessive dystonia-related genes including COL6A3 and TH. Additionally, we identified 180 deleterious variants in dominant dystonia-related genes based on computational pathogenicity predictions and four of which were considered as potentially pathogenic variants (p.W591X and p.G820S in ANO3, p.R678H in ADCY5, and p.R458Q in SLC2A1). A gene-based burden analysis revealed the increased burden of variant subgroups of TH, SQSTM1, THAP1, and ADCY5 in sporadic early-onset PD, whereas COL6A3 was associated with sporadic late-onset PD. However, none of them reached statistical significance after the Bonferroni correction. CONCLUSION: Our findings indicated that rare variants in several dystonia-related genes are suggestively associated with PD, and taken together, the role of COL6A3 and TH genes in PD is highlighted. Frontiers Media S.A. 2023-05-26 /pmc/articles/PMC10250656/ /pubmed/37304079 http://dx.doi.org/10.3389/fnagi.2023.1207114 Text en Copyright © 2023 Wang, Zhao, Pan, Zeng, Zhou, Xiang, Zhou, Xu, Sun, Tan, Yan, Li, Guo, Tang, Yu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Aging Neuroscience Wang, Yige Zhao, Yuwen Pan, Hongxu Zeng, Qian Zhou, Xiaoxia Xiang, Yaqin Zhou, Zhou Xu, Qian Sun, Qiying Tan, Jieqiong Yan, Xinxiang Li, Jinchen Guo, Jifeng Tang, Beisha Yu, Qiao Liu, Zhenhua Genetic analysis of dystonia-related genes in Parkinson's disease |
title | Genetic analysis of dystonia-related genes in Parkinson's disease |
title_full | Genetic analysis of dystonia-related genes in Parkinson's disease |
title_fullStr | Genetic analysis of dystonia-related genes in Parkinson's disease |
title_full_unstemmed | Genetic analysis of dystonia-related genes in Parkinson's disease |
title_short | Genetic analysis of dystonia-related genes in Parkinson's disease |
title_sort | genetic analysis of dystonia-related genes in parkinson's disease |
topic | Aging Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10250656/ https://www.ncbi.nlm.nih.gov/pubmed/37304079 http://dx.doi.org/10.3389/fnagi.2023.1207114 |
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