Cargando…

Regulation of mature mRNA levels by RNA processing efficiency

Transcription and co-transcriptional processes, including pre-mRNA splicing and mRNA cleavage and polyadenylation, regulate the production of mature mRNAs. The carboxyl terminal domain (CTD) of RNA polymerase (pol) II, which comprises 52 repeats of the Tyr1Ser2Pro3Thr4Ser5Pro6Ser7 peptide, is involv...

Descripción completa

Detalles Bibliográficos
Autores principales:	Henfrey, Callum, Murphy, Shona, Tellier, Michael
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	Standard Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10251645/ https://www.ncbi.nlm.nih.gov/pubmed/37305169 http://dx.doi.org/10.1093/nargab/lqad059

Ejemplares similares

A combination of mRNA features influence the efficiency of leaderless mRNA translation initiation
por: Bharmal, Mohammed-Husain M, et al.
Publicado: (2021)

Global variability analysis of mRNA and protein concentrations across and within human tissues
por: Wegler, Christine, et al.
Publicado: (2019)

Transcriptome sequencing suggests that pre-mRNA splicing counteracts widespread intronic cleavage and polyadenylation
por: Vlasenok, Maria, et al.
Publicado: (2023)

Comparative Analysis of mRNA Expression of Surface Antigens between Histiocytic and Nonhistiocytic Sarcoma in Dogs
por: Yamazaki, H., et al.
Publicado: (2013)

Comprehensive profiling of mRNA splicing indicates that GC content signals altered cassette exon inclusion in Ewing sarcoma
por: Graham, Garrett T, et al.
Publicado: (2022)

CDK9 and PP2A regulate RNA polymerase II transcription termination and coupled RNA maturation
por: Tellier, Michael, et al.
Publicado: (2022)

Measurement of IL‐12 (p40, p35), IL‐23p19, and IFN‐γ mRNA in Duodenal Biopsies of Cats with Inflammatory Enteropathy
por: Waly, N.E., et al.
Publicado: (2013)

Deep conservation of ribosome stall sites across RNA processing genes
por: Chyżyńska, Katarzyna, et al.
Publicado: (2021)

HIV Vpr protein upregulates microRNA-122 expression and stimulates hepatitis C virus replication
por: Peng, Milin, et al.
Publicado: (2015)

Pervasive effects of RNA degradation on Nanopore direct RNA sequencing
por: Prawer, Yair D J, et al.
Publicado: (2023)

Notch mRNA Expression in Drosophila Embryos Is Negatively Regulated at the Level of mRNA 3′ Processing
por: Shepherd, Andrew K., et al.
Publicado: (2009)

Alternative splicing impacts microRNA regulation within coding regions
por: Hackl, Lena Maria, et al.
Publicado: (2023)

Identification and analysis of consensus RNA motifs binding to the genome regulator CTCF
por: Kuang, Shuzhen, et al.
Publicado: (2020)

Quantification of mutant–allele expression at isoform level in cancer from RNA-seq data
por: Deng, Wenjiang, et al.
Publicado: (2022)

Deep analysis of RNA N(6)-adenosine methylation (m(6)A) patterns in human cells
por: Wang, Jun, et al.
Publicado: (2020)

Binding patterns of RNA-binding proteins to repeat-derived RNA sequences reveal putative functional RNA elements
por: Onoguchi, Masahiro, et al.
Publicado: (2021)

Transcription and Maturation of mRNA in Dinoflagellates
por: Roy, Sougata, et al.
Publicado: (2013)

Nuclear mRNA maturation and mRNA export control: from trypanosomes to opisthokonts
por: Kramer, Susanne
Publicado: (2021)

RNA-NRD: a non-redundant RNA structural dataset for benchmarking and functional analysis
por: Khan, Nabila Shahnaz, et al.
Publicado: (2023)

Genetic analysis of members of the species Oropouche virus and identification of a novel M segment sequence
por: Tilston-Lunel, Natasha L., et al.
Publicado: (2015)

Elucidating population-wide mycobacterial replication dynamics at the single-cell level
por: Mouton, Jacoba M., et al.
Publicado: (2016)

Machine learning a model for RNA structure prediction
por: Calonaci, Nicola, et al.
Publicado: (2020)

Characterization of novel primary miRNA transcription units in human cells using Bru-seq nascent RNA sequencing
por: Bedi, Karan, et al.
Publicado: (2019)

Identification and characterization of RNA pentaloop sequence families
por: Saon, Md Sharear, et al.
Publicado: (2023)

Prediction and analysis of functional RNA structures within the integrative genomics viewer
por: Rouse, Warren B, et al.
Publicado: (2022)

Concentrating pre-mRNA processing factors in the histone locus body facilitates efficient histone mRNA biogenesis
por: Tatomer, Deirdre C., et al.
Publicado: (2016)

Mitochondrial Polyadenylation Is a One-Step Process Required for mRNA Integrity and tRNA Maturation
por: Bratic, Ana, et al.
Publicado: (2016)

DSIF modulates RNA polymerase II occupancy according to template G + C content
por: Deng, Ning, et al.
Publicado: (2022)

Generation and network analysis of an RNA-seq transcriptional atlas for the rat
por: Summers, Kim M, et al.
Publicado: (2022)

A map of the SARS-CoV-2 RNA structurome
por: Andrews, Ryan J, et al.
Publicado: (2021)

Inhibition of mRNA maturation in trypanosomes causes the formation of novel foci at the nuclear periphery containing cytoplasmic regulators of mRNA fate
por: Kramer, Susanne, et al.
Publicado: (2012)

Pre-infection transcript levels of FAM26F in peripheral blood mononuclear cells inform about overall plasma viral load in acute and post-acute phase after simian immunodeficiency virus infection
por: Javed, Aneela, et al.
Publicado: (2016)

RNA sequencing indicates widespread conservation of circadian clocks in marine zooplankton
por: Raghavan, Venket, et al.
Publicado: (2023)

Cooperativity boosts affinity and specificity of proteins with multiple RNA-binding domains
por: Stitzinger, Simon H, et al.
Publicado: (2023)

Elevated A-to-I RNA editing in COVID-19 infected individuals
por: Merdler-Rabinowicz, Rona, et al.
Publicado: (2023)

Analysis of mRNA-derived siRNAs in mutants of mRNA maturation and surveillance pathways in Arabidopsis thaliana
por: Krzyszton, Michal, et al.
Publicado: (2022)

Dimensionality reduction for single cell RNA sequencing data using constrained robust non-negative matrix factorization
por: Zhang, Shuqin, et al.
Publicado: (2020)

Assembly and regulation of the mammalian mRNA processing body
por: Bloch, Donald B., et al.
Publicado: (2023)

TAGADA: a scalable pipeline to improve genome annotations with RNA-seq data
por: Kurylo, Cyril, et al.
Publicado: (2023)

Tailored machine learning models for functional RNA detection in genome-wide screens
por: Klapproth, Christopher, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_josdoovrjhd318glj72djp1ffs