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Allium cytogenetics: a critical review on the Indian taxa
The genus Allium Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of Allium species is missing which...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10252142/ https://www.ncbi.nlm.nih.gov/pubmed/37304149 http://dx.doi.org/10.3897/CompCytogen.17.98903 |
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author | Bhowmick, Biplab Kumar Sarkar, Sayantika Roychowdhury, Dipasree Patil, Sayali D. Lekhak, Manoj M. Ohri, Deepak Rama Rao, Satyawada Yadav, S. R. Verma, R. C. Dhar, Manoj K. Raina, S. N. Jha, Sumita |
author_facet | Bhowmick, Biplab Kumar Sarkar, Sayantika Roychowdhury, Dipasree Patil, Sayali D. Lekhak, Manoj M. Ohri, Deepak Rama Rao, Satyawada Yadav, S. R. Verma, R. C. Dhar, Manoj K. Raina, S. N. Jha, Sumita |
author_sort | Bhowmick, Biplab Kumar |
collection | PubMed |
description | The genus Allium Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of Allium species is missing which has been considered in the review for the species occurring in India. The most prominent base number is x=8, with few records of x=7, 10, 11. The genome size has sufficient clues for divergence, ranging from 7.8 pg/1C to 30.0 pg/1C in diploid and 15.16 pg/1C to 41.78 pg/1C in polyploid species. Although the karyotypes are seemingly dominated by metacentrics, substantial variation in nucleolus organizing regions (NORs) is noteworthy. The chromosomal rearrangement between A.cepa Linnaeus, 1753 and its allied species has paved way to appreciate genomic evolution within Allium. The presence of a unique telomere sequence and its conservation in Allium sets this genus apart from all other Amaryllids and supports monophyletic origin. Any cytogenetic investigation regarding NOR variability, telomere sequence and genome size in the Indian species becomes the most promising field to decipher chromosome evolution against the background of species diversity and evolution, especially in the Indian subcontinent. |
format | Online Article Text |
id | pubmed-10252142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-102521422023-06-10 Allium cytogenetics: a critical review on the Indian taxa Bhowmick, Biplab Kumar Sarkar, Sayantika Roychowdhury, Dipasree Patil, Sayali D. Lekhak, Manoj M. Ohri, Deepak Rama Rao, Satyawada Yadav, S. R. Verma, R. C. Dhar, Manoj K. Raina, S. N. Jha, Sumita Comp Cytogenet Review Article The genus Allium Linnaeus, 1753 (tribe Allieae) contains about 800 species worldwide of which almost 38 species are reported in India, including the globally important crops (onion, garlic, leek, shallot) and many wild species. A satisfactory chromosomal catalogue of Allium species is missing which has been considered in the review for the species occurring in India. The most prominent base number is x=8, with few records of x=7, 10, 11. The genome size has sufficient clues for divergence, ranging from 7.8 pg/1C to 30.0 pg/1C in diploid and 15.16 pg/1C to 41.78 pg/1C in polyploid species. Although the karyotypes are seemingly dominated by metacentrics, substantial variation in nucleolus organizing regions (NORs) is noteworthy. The chromosomal rearrangement between A.cepa Linnaeus, 1753 and its allied species has paved way to appreciate genomic evolution within Allium. The presence of a unique telomere sequence and its conservation in Allium sets this genus apart from all other Amaryllids and supports monophyletic origin. Any cytogenetic investigation regarding NOR variability, telomere sequence and genome size in the Indian species becomes the most promising field to decipher chromosome evolution against the background of species diversity and evolution, especially in the Indian subcontinent. Pensoft Publishers 2023-05-29 /pmc/articles/PMC10252142/ /pubmed/37304149 http://dx.doi.org/10.3897/CompCytogen.17.98903 Text en Biplab Kumar Bhowmick, Sayantika Sarkar, Dipasree Roychowdhury, Sayali D. Patil, Manoj M. Lekhak, Deepak Ohri, Satyawada Rama Rao, S. R. Yadav, R. C. Verma, Manoj K. Dhar, S. N. Raina, Sumita Jha https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Review Article Bhowmick, Biplab Kumar Sarkar, Sayantika Roychowdhury, Dipasree Patil, Sayali D. Lekhak, Manoj M. Ohri, Deepak Rama Rao, Satyawada Yadav, S. R. Verma, R. C. Dhar, Manoj K. Raina, S. N. Jha, Sumita Allium cytogenetics: a critical review on the Indian taxa |
title | Allium cytogenetics: a critical review on the Indian taxa |
title_full | Allium cytogenetics: a critical review on the Indian taxa |
title_fullStr | Allium cytogenetics: a critical review on the Indian taxa |
title_full_unstemmed | Allium cytogenetics: a critical review on the Indian taxa |
title_short | Allium cytogenetics: a critical review on the Indian taxa |
title_sort | allium cytogenetics: a critical review on the indian taxa |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10252142/ https://www.ncbi.nlm.nih.gov/pubmed/37304149 http://dx.doi.org/10.3897/CompCytogen.17.98903 |
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