Cargando…
DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG
Diffuse intrinsic pontine glioma (DIPG) accounts for 80% of pediatric brainstem tumors and about 10-20% of all central nervous system tumors in childhood. Despite the adoption of aggressive therapeutic approaches, DIPG remains the leading cause of cancer-related mortality in childhood: prognosis is...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260076/ http://dx.doi.org/10.1093/neuonc/noad073.074 |
_version_ | 1785057782978838528 |
---|---|
author | Scilimati, Antonio Armenise, Domenico Baldelli, Olga Centonze, Antonella Derri, Davide Ferorelli, Savina Miciaccia, Morena Solidoro, Roberta Perrone, Maria Grazia |
author_facet | Scilimati, Antonio Armenise, Domenico Baldelli, Olga Centonze, Antonella Derri, Davide Ferorelli, Savina Miciaccia, Morena Solidoro, Roberta Perrone, Maria Grazia |
author_sort | Scilimati, Antonio |
collection | PubMed |
description | Diffuse intrinsic pontine glioma (DIPG) accounts for 80% of pediatric brainstem tumors and about 10-20% of all central nervous system tumors in childhood. Despite the adoption of aggressive therapeutic approaches, DIPG remains the leading cause of cancer-related mortality in childhood: prognosis is still poor with more than 90% of affected children dying within 18-24 months from the diagnosis.1 Decades of clinical attempts involving more than 200 trials evaluating different conventional cytotoxic drugs, targeted drugs and studies with radiation dose escalating and new radio sensitizing agents, have failed to improve the overall survival of children with DIPG. Since available drugs have proven no benefits hereto for DIPG, it is fundamental to gain insights into the gene expression profile of DIPG patients and speed up the discovery of novel therapeutics for this dismal malignancy. Only the compound ONC201 was discovered to reduce DIPG tumors size in DIPG H3K27M mutated and now is in phase III clinical trials. Given the complex molecular mechanisms underlying DIPG, it would be necessary to fully utilize gene expression profiles to build a fully knowledge of DIPG-related genes and pathways. Preliminarily, the gene expression profile of eight pediatric DIPG samples and two primary pontine tissue samples was downloaded and analyzed starting from the Gene Expression Omnibus (GEO) database2. The GEO data were used to evaluate the differentially expressed genes (DEGs) in the pediatric DIPG samples. Subsequently, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and Reactome pathways of DEGs were enriched, integrated, and analyzed to find out genes and signaling pathways involved in the biological and clinic-pathological features of DIPG. More data are being to be added to our meta-analysis. |
format | Online Article Text |
id | pubmed-10260076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-102600762023-06-13 DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG Scilimati, Antonio Armenise, Domenico Baldelli, Olga Centonze, Antonella Derri, Davide Ferorelli, Savina Miciaccia, Morena Solidoro, Roberta Perrone, Maria Grazia Neuro Oncol Final Category: Diffuse Intrinsic Pontine Glioma/Diffuse Midline Gliomas - DPIG Diffuse intrinsic pontine glioma (DIPG) accounts for 80% of pediatric brainstem tumors and about 10-20% of all central nervous system tumors in childhood. Despite the adoption of aggressive therapeutic approaches, DIPG remains the leading cause of cancer-related mortality in childhood: prognosis is still poor with more than 90% of affected children dying within 18-24 months from the diagnosis.1 Decades of clinical attempts involving more than 200 trials evaluating different conventional cytotoxic drugs, targeted drugs and studies with radiation dose escalating and new radio sensitizing agents, have failed to improve the overall survival of children with DIPG. Since available drugs have proven no benefits hereto for DIPG, it is fundamental to gain insights into the gene expression profile of DIPG patients and speed up the discovery of novel therapeutics for this dismal malignancy. Only the compound ONC201 was discovered to reduce DIPG tumors size in DIPG H3K27M mutated and now is in phase III clinical trials. Given the complex molecular mechanisms underlying DIPG, it would be necessary to fully utilize gene expression profiles to build a fully knowledge of DIPG-related genes and pathways. Preliminarily, the gene expression profile of eight pediatric DIPG samples and two primary pontine tissue samples was downloaded and analyzed starting from the Gene Expression Omnibus (GEO) database2. The GEO data were used to evaluate the differentially expressed genes (DEGs) in the pediatric DIPG samples. Subsequently, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and Reactome pathways of DEGs were enriched, integrated, and analyzed to find out genes and signaling pathways involved in the biological and clinic-pathological features of DIPG. More data are being to be added to our meta-analysis. Oxford University Press 2023-06-12 /pmc/articles/PMC10260076/ http://dx.doi.org/10.1093/neuonc/noad073.074 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Final Category: Diffuse Intrinsic Pontine Glioma/Diffuse Midline Gliomas - DPIG Scilimati, Antonio Armenise, Domenico Baldelli, Olga Centonze, Antonella Derri, Davide Ferorelli, Savina Miciaccia, Morena Solidoro, Roberta Perrone, Maria Grazia DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title | DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title_full | DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title_fullStr | DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title_full_unstemmed | DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title_short | DIPG-27. DIFFUSE INTRINSIC PONTINE GLIOMA (DIPG) CHALLENGE: FROM GENE EXPRESSION PROFILE TO DRUG |
title_sort | dipg-27. diffuse intrinsic pontine glioma (dipg) challenge: from gene expression profile to drug |
topic | Final Category: Diffuse Intrinsic Pontine Glioma/Diffuse Midline Gliomas - DPIG |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260076/ http://dx.doi.org/10.1093/neuonc/noad073.074 |
work_keys_str_mv | AT scilimatiantonio dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT armenisedomenico dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT baldelliolga dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT centonzeantonella dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT derridavide dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT ferorellisavina dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT miciacciamorena dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT solidororoberta dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug AT perronemariagrazia dipg27diffuseintrinsicpontinegliomadipgchallengefromgeneexpressionprofiletodrug |