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Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260308/ https://www.ncbi.nlm.nih.gov/pubmed/37313353 http://dx.doi.org/10.1155/2023/3761799 |
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author | Nacambo, Haoua Sawadogo, Nerbéwendé Batieno, Teyiouê Benoit Joseph Ouedraogo, Mahamadi Hamed Congo, Abdoul Kader Zida, Wend-Pagnagde Felicien Marie Serge Nanema, Kiswendsida Romaric Sawadogo, Mahamadou |
author_facet | Nacambo, Haoua Sawadogo, Nerbéwendé Batieno, Teyiouê Benoit Joseph Ouedraogo, Mahamadi Hamed Congo, Abdoul Kader Zida, Wend-Pagnagde Felicien Marie Serge Nanema, Kiswendsida Romaric Sawadogo, Mahamadou |
author_sort | Nacambo, Haoua |
collection | PubMed |
description | Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such neglect would lead to the erosion of its genetic resource. The general objective of this study is to contribute to a better knowledge of the genetic diversity of the species in order to be able to issue scientific bases for its conservation, valorization, and genetic improvement. Sixty (60) accessions of Senna obtusifolia were collected in the wild from five provinces of three climatic zones of Burkina Faso. Molecular characterization was carried out using 18 SSR markers. Fifteen were polymorphic microsatellite markers leading one hundred and one (101) alleles in total, with an average of seven (7) alleles per locus. The number of effective alleles was 2.33. Expected heterozygosity, Shannon diversity index, and polymorphism information content averaged 0.47, 1.05, and 0.47. Molecular characterization revealed the existence of genetic diversity within the collection. This diversity has been structured into three genetic groups. Genetic group 3 presents the highest genetic diversity parameters. |
format | Online Article Text |
id | pubmed-10260308 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-102603082023-06-13 Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso Nacambo, Haoua Sawadogo, Nerbéwendé Batieno, Teyiouê Benoit Joseph Ouedraogo, Mahamadi Hamed Congo, Abdoul Kader Zida, Wend-Pagnagde Felicien Marie Serge Nanema, Kiswendsida Romaric Sawadogo, Mahamadou ScientificWorldJournal Research Article Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such neglect would lead to the erosion of its genetic resource. The general objective of this study is to contribute to a better knowledge of the genetic diversity of the species in order to be able to issue scientific bases for its conservation, valorization, and genetic improvement. Sixty (60) accessions of Senna obtusifolia were collected in the wild from five provinces of three climatic zones of Burkina Faso. Molecular characterization was carried out using 18 SSR markers. Fifteen were polymorphic microsatellite markers leading one hundred and one (101) alleles in total, with an average of seven (7) alleles per locus. The number of effective alleles was 2.33. Expected heterozygosity, Shannon diversity index, and polymorphism information content averaged 0.47, 1.05, and 0.47. Molecular characterization revealed the existence of genetic diversity within the collection. This diversity has been structured into three genetic groups. Genetic group 3 presents the highest genetic diversity parameters. Hindawi 2023-06-05 /pmc/articles/PMC10260308/ /pubmed/37313353 http://dx.doi.org/10.1155/2023/3761799 Text en Copyright © 2023 Haoua Nacambo et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Nacambo, Haoua Sawadogo, Nerbéwendé Batieno, Teyiouê Benoit Joseph Ouedraogo, Mahamadi Hamed Congo, Abdoul Kader Zida, Wend-Pagnagde Felicien Marie Serge Nanema, Kiswendsida Romaric Sawadogo, Mahamadou Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title | Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title_full | Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title_fullStr | Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title_full_unstemmed | Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title_short | Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso |
title_sort | assessment of genetic diversity of a collection of senna obtusifolia (l.) irwin and barneby using ssrs markers in burkina faso |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260308/ https://www.ncbi.nlm.nih.gov/pubmed/37313353 http://dx.doi.org/10.1155/2023/3761799 |
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