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Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso

Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such...

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Autores principales: Nacambo, Haoua, Sawadogo, Nerbéwendé, Batieno, Teyiouê Benoit Joseph, Ouedraogo, Mahamadi Hamed, Congo, Abdoul Kader, Zida, Wend-Pagnagde Felicien Marie Serge, Nanema, Kiswendsida Romaric, Sawadogo, Mahamadou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260308/
https://www.ncbi.nlm.nih.gov/pubmed/37313353
http://dx.doi.org/10.1155/2023/3761799
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author Nacambo, Haoua
Sawadogo, Nerbéwendé
Batieno, Teyiouê Benoit Joseph
Ouedraogo, Mahamadi Hamed
Congo, Abdoul Kader
Zida, Wend-Pagnagde Felicien Marie Serge
Nanema, Kiswendsida Romaric
Sawadogo, Mahamadou
author_facet Nacambo, Haoua
Sawadogo, Nerbéwendé
Batieno, Teyiouê Benoit Joseph
Ouedraogo, Mahamadi Hamed
Congo, Abdoul Kader
Zida, Wend-Pagnagde Felicien Marie Serge
Nanema, Kiswendsida Romaric
Sawadogo, Mahamadou
author_sort Nacambo, Haoua
collection PubMed
description Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such neglect would lead to the erosion of its genetic resource. The general objective of this study is to contribute to a better knowledge of the genetic diversity of the species in order to be able to issue scientific bases for its conservation, valorization, and genetic improvement. Sixty (60) accessions of Senna obtusifolia were collected in the wild from five provinces of three climatic zones of Burkina Faso. Molecular characterization was carried out using 18 SSR markers. Fifteen were polymorphic microsatellite markers leading one hundred and one (101) alleles in total, with an average of seven (7) alleles per locus. The number of effective alleles was 2.33. Expected heterozygosity, Shannon diversity index, and polymorphism information content averaged 0.47, 1.05, and 0.47. Molecular characterization revealed the existence of genetic diversity within the collection. This diversity has been structured into three genetic groups. Genetic group 3 presents the highest genetic diversity parameters.
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spelling pubmed-102603082023-06-13 Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso Nacambo, Haoua Sawadogo, Nerbéwendé Batieno, Teyiouê Benoit Joseph Ouedraogo, Mahamadi Hamed Congo, Abdoul Kader Zida, Wend-Pagnagde Felicien Marie Serge Nanema, Kiswendsida Romaric Sawadogo, Mahamadou ScientificWorldJournal Research Article Sennaobtusifolia (L.) is a plant in the genus Senna that contributes to improving nutritional quality, food security, and better health protection for rural populations. However, very few studies have been devoted to it in Burkina Faso. Consequently, its genetic diversity remains poorly known. Such neglect would lead to the erosion of its genetic resource. The general objective of this study is to contribute to a better knowledge of the genetic diversity of the species in order to be able to issue scientific bases for its conservation, valorization, and genetic improvement. Sixty (60) accessions of Senna obtusifolia were collected in the wild from five provinces of three climatic zones of Burkina Faso. Molecular characterization was carried out using 18 SSR markers. Fifteen were polymorphic microsatellite markers leading one hundred and one (101) alleles in total, with an average of seven (7) alleles per locus. The number of effective alleles was 2.33. Expected heterozygosity, Shannon diversity index, and polymorphism information content averaged 0.47, 1.05, and 0.47. Molecular characterization revealed the existence of genetic diversity within the collection. This diversity has been structured into three genetic groups. Genetic group 3 presents the highest genetic diversity parameters. Hindawi 2023-06-05 /pmc/articles/PMC10260308/ /pubmed/37313353 http://dx.doi.org/10.1155/2023/3761799 Text en Copyright © 2023 Haoua Nacambo et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Nacambo, Haoua
Sawadogo, Nerbéwendé
Batieno, Teyiouê Benoit Joseph
Ouedraogo, Mahamadi Hamed
Congo, Abdoul Kader
Zida, Wend-Pagnagde Felicien Marie Serge
Nanema, Kiswendsida Romaric
Sawadogo, Mahamadou
Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title_full Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title_fullStr Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title_full_unstemmed Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title_short Assessment of Genetic Diversity of a Collection of Senna obtusifolia (L.) Irwin and Barneby Using SSRs Markers in Burkina Faso
title_sort assessment of genetic diversity of a collection of senna obtusifolia (l.) irwin and barneby using ssrs markers in burkina faso
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10260308/
https://www.ncbi.nlm.nih.gov/pubmed/37313353
http://dx.doi.org/10.1155/2023/3761799
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