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Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gen...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10263354/ https://www.ncbi.nlm.nih.gov/pubmed/37310980 http://dx.doi.org/10.1371/journal.pone.0282749 |
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author | Kashif, Mohd Alsaiari, Ahad Amer Kumar, Bhupendra Asalam, Mohd Khan, Mohammad Imran Ahmad, Abrar Lone, Rayees Ahmad Almehmadi, Mazen Zamzami, Mazin A. Akhtar, Mohd Sohail |
author_facet | Kashif, Mohd Alsaiari, Ahad Amer Kumar, Bhupendra Asalam, Mohd Khan, Mohammad Imran Ahmad, Abrar Lone, Rayees Ahmad Almehmadi, Mazen Zamzami, Mazin A. Akhtar, Mohd Sohail |
author_sort | Kashif, Mohd |
collection | PubMed |
description | Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gene was amplified by standard PCR and subsequently cloned downstream to bacteriophage T7 inducible promoter and lac operator of expression vector pET21d(+). Additionally, immobilized metal affinity chromatography (IMAC) was used to purify the protein upto its homogeneity, and its homogeneous purity was further confirmed through western blotting. Size exclusion chromatography implies that Rrd1 is existing as monomer in its natural state. Foldwise Rrd1 protein belongs to PTPA-like protein superfamily. Rrd1 showed characteristic negative minima at 222 and 208 nm represent protein typically acquired α helix in the far-UV CD spectra. Fluorescence spectra showed properly folded tertiary structures of Rrd1 at physiological conditions. Rrd1protein can be identified from different species using a fingerprint created by PIPSA analysis. The protein’s abundance could aid in its crystallization, biophysical characterization and identification of other-interacting partners of Rrd1 protein. |
format | Online Article Text |
id | pubmed-10263354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-102633542023-06-15 Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae Kashif, Mohd Alsaiari, Ahad Amer Kumar, Bhupendra Asalam, Mohd Khan, Mohammad Imran Ahmad, Abrar Lone, Rayees Ahmad Almehmadi, Mazen Zamzami, Mazin A. Akhtar, Mohd Sohail PLoS One Research Article Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gene was amplified by standard PCR and subsequently cloned downstream to bacteriophage T7 inducible promoter and lac operator of expression vector pET21d(+). Additionally, immobilized metal affinity chromatography (IMAC) was used to purify the protein upto its homogeneity, and its homogeneous purity was further confirmed through western blotting. Size exclusion chromatography implies that Rrd1 is existing as monomer in its natural state. Foldwise Rrd1 protein belongs to PTPA-like protein superfamily. Rrd1 showed characteristic negative minima at 222 and 208 nm represent protein typically acquired α helix in the far-UV CD spectra. Fluorescence spectra showed properly folded tertiary structures of Rrd1 at physiological conditions. Rrd1protein can be identified from different species using a fingerprint created by PIPSA analysis. The protein’s abundance could aid in its crystallization, biophysical characterization and identification of other-interacting partners of Rrd1 protein. Public Library of Science 2023-06-13 /pmc/articles/PMC10263354/ /pubmed/37310980 http://dx.doi.org/10.1371/journal.pone.0282749 Text en © 2023 Kashif et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kashif, Mohd Alsaiari, Ahad Amer Kumar, Bhupendra Asalam, Mohd Khan, Mohammad Imran Ahmad, Abrar Lone, Rayees Ahmad Almehmadi, Mazen Zamzami, Mazin A. Akhtar, Mohd Sohail Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title | Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title_full | Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title_fullStr | Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title_full_unstemmed | Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title_short | Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae |
title_sort | recombinant expression and preliminary characterization of peptidyl-prolyl cis/trans-isomerase rrd1 from saccharomyces cerevisiae |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10263354/ https://www.ncbi.nlm.nih.gov/pubmed/37310980 http://dx.doi.org/10.1371/journal.pone.0282749 |
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