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Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae

Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gen...

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Autores principales: Kashif, Mohd, Alsaiari, Ahad Amer, Kumar, Bhupendra, Asalam, Mohd, Khan, Mohammad Imran, Ahmad, Abrar, Lone, Rayees Ahmad, Almehmadi, Mazen, Zamzami, Mazin A., Akhtar, Mohd Sohail
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10263354/
https://www.ncbi.nlm.nih.gov/pubmed/37310980
http://dx.doi.org/10.1371/journal.pone.0282749
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author Kashif, Mohd
Alsaiari, Ahad Amer
Kumar, Bhupendra
Asalam, Mohd
Khan, Mohammad Imran
Ahmad, Abrar
Lone, Rayees Ahmad
Almehmadi, Mazen
Zamzami, Mazin A.
Akhtar, Mohd Sohail
author_facet Kashif, Mohd
Alsaiari, Ahad Amer
Kumar, Bhupendra
Asalam, Mohd
Khan, Mohammad Imran
Ahmad, Abrar
Lone, Rayees Ahmad
Almehmadi, Mazen
Zamzami, Mazin A.
Akhtar, Mohd Sohail
author_sort Kashif, Mohd
collection PubMed
description Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gene was amplified by standard PCR and subsequently cloned downstream to bacteriophage T7 inducible promoter and lac operator of expression vector pET21d(+). Additionally, immobilized metal affinity chromatography (IMAC) was used to purify the protein upto its homogeneity, and its homogeneous purity was further confirmed through western blotting. Size exclusion chromatography implies that Rrd1 is existing as monomer in its natural state. Foldwise Rrd1 protein belongs to PTPA-like protein superfamily. Rrd1 showed characteristic negative minima at 222 and 208 nm represent protein typically acquired α helix in the far-UV CD spectra. Fluorescence spectra showed properly folded tertiary structures of Rrd1 at physiological conditions. Rrd1protein can be identified from different species using a fingerprint created by PIPSA analysis. The protein’s abundance could aid in its crystallization, biophysical characterization and identification of other-interacting partners of Rrd1 protein.
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spelling pubmed-102633542023-06-15 Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae Kashif, Mohd Alsaiari, Ahad Amer Kumar, Bhupendra Asalam, Mohd Khan, Mohammad Imran Ahmad, Abrar Lone, Rayees Ahmad Almehmadi, Mazen Zamzami, Mazin A. Akhtar, Mohd Sohail PLoS One Research Article Sacchromycescerevisiae Peptidyl-prolylcis/trans-isomerase Rrd1 has been linked to DNA repair, bud morphogenesis, advancement of the G1 phase, DNA replication stress, microtubule dynamics and is also necessary for the quick decrease in Sgs1p levels in response to rapamycin. In present study, Rrd1 gene was amplified by standard PCR and subsequently cloned downstream to bacteriophage T7 inducible promoter and lac operator of expression vector pET21d(+). Additionally, immobilized metal affinity chromatography (IMAC) was used to purify the protein upto its homogeneity, and its homogeneous purity was further confirmed through western blotting. Size exclusion chromatography implies that Rrd1 is existing as monomer in its natural state. Foldwise Rrd1 protein belongs to PTPA-like protein superfamily. Rrd1 showed characteristic negative minima at 222 and 208 nm represent protein typically acquired α helix in the far-UV CD spectra. Fluorescence spectra showed properly folded tertiary structures of Rrd1 at physiological conditions. Rrd1protein can be identified from different species using a fingerprint created by PIPSA analysis. The protein’s abundance could aid in its crystallization, biophysical characterization and identification of other-interacting partners of Rrd1 protein. Public Library of Science 2023-06-13 /pmc/articles/PMC10263354/ /pubmed/37310980 http://dx.doi.org/10.1371/journal.pone.0282749 Text en © 2023 Kashif et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kashif, Mohd
Alsaiari, Ahad Amer
Kumar, Bhupendra
Asalam, Mohd
Khan, Mohammad Imran
Ahmad, Abrar
Lone, Rayees Ahmad
Almehmadi, Mazen
Zamzami, Mazin A.
Akhtar, Mohd Sohail
Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title_full Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title_fullStr Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title_full_unstemmed Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title_short Recombinant expression and preliminary characterization of Peptidyl-prolyl cis/trans-isomerase Rrd1 from Saccharomyces cerevisiae
title_sort recombinant expression and preliminary characterization of peptidyl-prolyl cis/trans-isomerase rrd1 from saccharomyces cerevisiae
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10263354/
https://www.ncbi.nlm.nih.gov/pubmed/37310980
http://dx.doi.org/10.1371/journal.pone.0282749
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