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Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning
Circulating circular RNAs (circRNAs) are emerging as novel biomarkers for cardiovascular diseases (CVDs). Machine learning can provide optimal predictions on the diagnosis of diseases. Here we performed a proof‐of‐concept study to determine if combining circRNAs with an artificial intelligence appro...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10264944/ https://www.ncbi.nlm.nih.gov/pubmed/37323876 http://dx.doi.org/10.1002/mco2.299 |
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author | Zhou, Qiulian Boeckel, Jes‐Niels Yao, Jianhua Zhao, Juan Bai, Yuzheng Lv, Yicheng Hu, Meiyu Meng, Danni Xie, Yuan Yu, Pujiao Xi, Peng Xu, Jiahong Zhang, Yi Dimmeler, Stefanie Xiao, Junjie |
author_facet | Zhou, Qiulian Boeckel, Jes‐Niels Yao, Jianhua Zhao, Juan Bai, Yuzheng Lv, Yicheng Hu, Meiyu Meng, Danni Xie, Yuan Yu, Pujiao Xi, Peng Xu, Jiahong Zhang, Yi Dimmeler, Stefanie Xiao, Junjie |
author_sort | Zhou, Qiulian |
collection | PubMed |
description | Circulating circular RNAs (circRNAs) are emerging as novel biomarkers for cardiovascular diseases (CVDs). Machine learning can provide optimal predictions on the diagnosis of diseases. Here we performed a proof‐of‐concept study to determine if combining circRNAs with an artificial intelligence approach works in diagnosing CVD. We used acute myocardial infarction (AMI) as a model setup to prove the claim. We determined the expression level of five hypoxia‐induced circRNAs, including cZNF292, cAFF1, cDENND4C, cTHSD1, and cSRSF4, in the whole blood of coronary angiography positive AMI and negative non‐AMI patients. Based on feature selection by using lasso with 10‐fold cross validation, prediction model by logistic regression, and ROC curve analysis, we found that cZNF292 combined with clinical information (CM), including age, gender, body mass index, heart rate, and diastolic blood pressure, can predict AMI effectively. In a validation cohort, CM + cZNF292 can separate AMI and non‐AMI patients, unstable angina and AMI patients, acute coronary syndromes (ACS), and non‐ACS patients. RNA stability study demonstrated that cZNF292 was stable. Knockdown of cZNF292 in endothelial cells or cardiomyocytes showed anti‐apoptosis effects in oxygen glucose deprivation/reoxygenation. Thus, we identify circulating cZNF292 as a potential biomarker for AMI and construct a prediction model “CM + cZNF292.” |
format | Online Article Text |
id | pubmed-10264944 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102649442023-06-15 Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning Zhou, Qiulian Boeckel, Jes‐Niels Yao, Jianhua Zhao, Juan Bai, Yuzheng Lv, Yicheng Hu, Meiyu Meng, Danni Xie, Yuan Yu, Pujiao Xi, Peng Xu, Jiahong Zhang, Yi Dimmeler, Stefanie Xiao, Junjie MedComm (2020) Original Articles Circulating circular RNAs (circRNAs) are emerging as novel biomarkers for cardiovascular diseases (CVDs). Machine learning can provide optimal predictions on the diagnosis of diseases. Here we performed a proof‐of‐concept study to determine if combining circRNAs with an artificial intelligence approach works in diagnosing CVD. We used acute myocardial infarction (AMI) as a model setup to prove the claim. We determined the expression level of five hypoxia‐induced circRNAs, including cZNF292, cAFF1, cDENND4C, cTHSD1, and cSRSF4, in the whole blood of coronary angiography positive AMI and negative non‐AMI patients. Based on feature selection by using lasso with 10‐fold cross validation, prediction model by logistic regression, and ROC curve analysis, we found that cZNF292 combined with clinical information (CM), including age, gender, body mass index, heart rate, and diastolic blood pressure, can predict AMI effectively. In a validation cohort, CM + cZNF292 can separate AMI and non‐AMI patients, unstable angina and AMI patients, acute coronary syndromes (ACS), and non‐ACS patients. RNA stability study demonstrated that cZNF292 was stable. Knockdown of cZNF292 in endothelial cells or cardiomyocytes showed anti‐apoptosis effects in oxygen glucose deprivation/reoxygenation. Thus, we identify circulating cZNF292 as a potential biomarker for AMI and construct a prediction model “CM + cZNF292.” John Wiley and Sons Inc. 2023-06-13 /pmc/articles/PMC10264944/ /pubmed/37323876 http://dx.doi.org/10.1002/mco2.299 Text en © 2023 The Authors. MedComm published by Sichuan International Medical Exchange & Promotion Association (SCIMEA) and John Wiley & Sons Australia, Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhou, Qiulian Boeckel, Jes‐Niels Yao, Jianhua Zhao, Juan Bai, Yuzheng Lv, Yicheng Hu, Meiyu Meng, Danni Xie, Yuan Yu, Pujiao Xi, Peng Xu, Jiahong Zhang, Yi Dimmeler, Stefanie Xiao, Junjie Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title | Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title_full | Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title_fullStr | Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title_full_unstemmed | Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title_short | Diagnosis of acute myocardial infarction using a combination of circulating circular RNA cZNF292 and clinical information based on machine learning |
title_sort | diagnosis of acute myocardial infarction using a combination of circulating circular rna cznf292 and clinical information based on machine learning |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10264944/ https://www.ncbi.nlm.nih.gov/pubmed/37323876 http://dx.doi.org/10.1002/mco2.299 |
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