Cargando…

Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs

BACKGROUND: The Souss, located in southern Morocco, is one of the oldest areas of human settlement in North Africa. Despite this historical relevance, the Souss has not received sufficient attention in terms of population genetic studies. METHODS: In this study, we utilized the AmpFlSTR Identifiler...

Descripción completa

Detalles Bibliográficos
Autores principales: Dahbi, Noura, Cheffi, Khadija, El Khair, Abderrazak, Habbibeddine, Lamiaa, Talbi, Jalal, Hilali, Abderraouf, El Ossmani, Hicham
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10265100/
https://www.ncbi.nlm.nih.gov/pubmed/36852474
http://dx.doi.org/10.1002/mgg3.2156
_version_ 1785058460666167296
author Dahbi, Noura
Cheffi, Khadija
El Khair, Abderrazak
Habbibeddine, Lamiaa
Talbi, Jalal
Hilali, Abderraouf
El Ossmani, Hicham
author_facet Dahbi, Noura
Cheffi, Khadija
El Khair, Abderrazak
Habbibeddine, Lamiaa
Talbi, Jalal
Hilali, Abderraouf
El Ossmani, Hicham
author_sort Dahbi, Noura
collection PubMed
description BACKGROUND: The Souss, located in southern Morocco, is one of the oldest areas of human settlement in North Africa. Despite this historical relevance, the Souss has not received sufficient attention in terms of population genetic studies. METHODS: In this study, we utilized the AmpFlSTR Identifiler PCR amplification system to establish the allelic frequencies and statistical parameters of 15 autosomal STRs (Short Tandem Repeats) in 150 healthy unrelated Berber‐speaking individuals from the Souss. We explored the genetic relationships between Souss and other reference populations based on our dataset as well as previously published population data. RESULTS: A total of 210 alleles were detected with corresponding allele frequencies ranging from 0.003 to 0.367. The most polymorphic locus was D18S51 with 23 alleles which was also the most discriminating locus as expected. The phylogenetic analysis clustered the Souss closer to the Azrou and southern Moroccan populations. The population comparison showed affinity between the Souss and most North African populations, as well as with Middle Easterners and Europeans. CONCLUSION: Historical events and geographical proximity have contributed to the affinity between the Souss and surrounding North African, Southern European, and Middle Eastern populations. Overall, this study highlights the reliability of the 15 STRs for identifying individuals and assessing paternity in the Souss population.
format Online
Article
Text
id pubmed-10265100
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-102651002023-06-15 Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs Dahbi, Noura Cheffi, Khadija El Khair, Abderrazak Habbibeddine, Lamiaa Talbi, Jalal Hilali, Abderraouf El Ossmani, Hicham Mol Genet Genomic Med Original Articles BACKGROUND: The Souss, located in southern Morocco, is one of the oldest areas of human settlement in North Africa. Despite this historical relevance, the Souss has not received sufficient attention in terms of population genetic studies. METHODS: In this study, we utilized the AmpFlSTR Identifiler PCR amplification system to establish the allelic frequencies and statistical parameters of 15 autosomal STRs (Short Tandem Repeats) in 150 healthy unrelated Berber‐speaking individuals from the Souss. We explored the genetic relationships between Souss and other reference populations based on our dataset as well as previously published population data. RESULTS: A total of 210 alleles were detected with corresponding allele frequencies ranging from 0.003 to 0.367. The most polymorphic locus was D18S51 with 23 alleles which was also the most discriminating locus as expected. The phylogenetic analysis clustered the Souss closer to the Azrou and southern Moroccan populations. The population comparison showed affinity between the Souss and most North African populations, as well as with Middle Easterners and Europeans. CONCLUSION: Historical events and geographical proximity have contributed to the affinity between the Souss and surrounding North African, Southern European, and Middle Eastern populations. Overall, this study highlights the reliability of the 15 STRs for identifying individuals and assessing paternity in the Souss population. John Wiley and Sons Inc. 2023-02-27 /pmc/articles/PMC10265100/ /pubmed/36852474 http://dx.doi.org/10.1002/mgg3.2156 Text en © 2023 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Dahbi, Noura
Cheffi, Khadija
El Khair, Abderrazak
Habbibeddine, Lamiaa
Talbi, Jalal
Hilali, Abderraouf
El Ossmani, Hicham
Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title_full Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title_fullStr Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title_full_unstemmed Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title_short Genetic characterization of the Berber‐speaking population of Souss (Morocco) based on autosomal STRs
title_sort genetic characterization of the berber‐speaking population of souss (morocco) based on autosomal strs
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10265100/
https://www.ncbi.nlm.nih.gov/pubmed/36852474
http://dx.doi.org/10.1002/mgg3.2156
work_keys_str_mv AT dahbinoura geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT cheffikhadija geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT elkhairabderrazak geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT habbibeddinelamiaa geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT talbijalal geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT hilaliabderraouf geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs
AT elossmanihicham geneticcharacterizationoftheberberspeakingpopulationofsoussmoroccobasedonautosomalstrs