Cargando…

Statistical methods and resources for biomarker discovery using metabolomics

Metabolomics is a dynamic tool for elucidating biochemical changes in human health and disease. Metabolic profiles provide a close insight into physiological states and are highly volatile to genetic and environmental perturbations. Variation in metabolic profiles can inform mechanisms of pathology,...

Descripción completa

Detalles Bibliográficos
Autores principales: Anwardeen, Najeha R., Diboun, Ilhame, Mokrab, Younes, Althani, Asma A., Elrayess, Mohamed A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10266963/
https://www.ncbi.nlm.nih.gov/pubmed/37322419
http://dx.doi.org/10.1186/s12859-023-05383-0
_version_ 1785058843624996864
author Anwardeen, Najeha R.
Diboun, Ilhame
Mokrab, Younes
Althani, Asma A.
Elrayess, Mohamed A.
author_facet Anwardeen, Najeha R.
Diboun, Ilhame
Mokrab, Younes
Althani, Asma A.
Elrayess, Mohamed A.
author_sort Anwardeen, Najeha R.
collection PubMed
description Metabolomics is a dynamic tool for elucidating biochemical changes in human health and disease. Metabolic profiles provide a close insight into physiological states and are highly volatile to genetic and environmental perturbations. Variation in metabolic profiles can inform mechanisms of pathology, providing potential biomarkers for diagnosis and assessment of the risk of contracting a disease. With the advancement of high-throughput technologies, large-scale metabolomics data sources have become abundant. As such, careful statistical analysis of intricate metabolomics data is essential for deriving relevant and robust results that can be deployed in real-life clinical settings. Multiple tools have been developed for both data analysis and interpretations. In this review, we survey statistical approaches and corresponding statistical tools that are available for discovery of biomarkers using metabolomics.
format Online
Article
Text
id pubmed-10266963
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-102669632023-06-15 Statistical methods and resources for biomarker discovery using metabolomics Anwardeen, Najeha R. Diboun, Ilhame Mokrab, Younes Althani, Asma A. Elrayess, Mohamed A. BMC Bioinformatics Review Metabolomics is a dynamic tool for elucidating biochemical changes in human health and disease. Metabolic profiles provide a close insight into physiological states and are highly volatile to genetic and environmental perturbations. Variation in metabolic profiles can inform mechanisms of pathology, providing potential biomarkers for diagnosis and assessment of the risk of contracting a disease. With the advancement of high-throughput technologies, large-scale metabolomics data sources have become abundant. As such, careful statistical analysis of intricate metabolomics data is essential for deriving relevant and robust results that can be deployed in real-life clinical settings. Multiple tools have been developed for both data analysis and interpretations. In this review, we survey statistical approaches and corresponding statistical tools that are available for discovery of biomarkers using metabolomics. BioMed Central 2023-06-15 /pmc/articles/PMC10266963/ /pubmed/37322419 http://dx.doi.org/10.1186/s12859-023-05383-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
Anwardeen, Najeha R.
Diboun, Ilhame
Mokrab, Younes
Althani, Asma A.
Elrayess, Mohamed A.
Statistical methods and resources for biomarker discovery using metabolomics
title Statistical methods and resources for biomarker discovery using metabolomics
title_full Statistical methods and resources for biomarker discovery using metabolomics
title_fullStr Statistical methods and resources for biomarker discovery using metabolomics
title_full_unstemmed Statistical methods and resources for biomarker discovery using metabolomics
title_short Statistical methods and resources for biomarker discovery using metabolomics
title_sort statistical methods and resources for biomarker discovery using metabolomics
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10266963/
https://www.ncbi.nlm.nih.gov/pubmed/37322419
http://dx.doi.org/10.1186/s12859-023-05383-0
work_keys_str_mv AT anwardeennajehar statisticalmethodsandresourcesforbiomarkerdiscoveryusingmetabolomics
AT dibounilhame statisticalmethodsandresourcesforbiomarkerdiscoveryusingmetabolomics
AT mokrabyounes statisticalmethodsandresourcesforbiomarkerdiscoveryusingmetabolomics
AT althaniasmaa statisticalmethodsandresourcesforbiomarkerdiscoveryusingmetabolomics
AT elrayessmohameda statisticalmethodsandresourcesforbiomarkerdiscoveryusingmetabolomics