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Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model
We have applied the sensitize-train-hack-community model to build awareness of and capacity in bioinformatics in Kenya. Open science is the practice of science openly and collaboratively, with tools, techniques, and data freely shared to facilitate reuse and collaboration. Open science is not a mand...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267827/ https://www.ncbi.nlm.nih.gov/pubmed/37324282 http://dx.doi.org/10.3389/frma.2023.1070390 |
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author | Karega, Pauline Mwaura, David K. Mwangi, Kennedy W. Wanjiku, Margaret Landi, Michael Kibet, Caleb K. |
author_facet | Karega, Pauline Mwaura, David K. Mwangi, Kennedy W. Wanjiku, Margaret Landi, Michael Kibet, Caleb K. |
author_sort | Karega, Pauline |
collection | PubMed |
description | We have applied the sensitize-train-hack-community model to build awareness of and capacity in bioinformatics in Kenya. Open science is the practice of science openly and collaboratively, with tools, techniques, and data freely shared to facilitate reuse and collaboration. Open science is not a mandatory curriculum course in schools, whereas bioinformatics is relatively new in some African regions. Open science tools can significantly enhance bioinformatics, leading to increased reproducibility. However, open science and bioinformatics skills, especially blended, are still lacking among students and researchers in resource-constrained regions. We note the need to be aware of the power of open science among the bioinformatics community and a clear strategy to learn bioinformatics and open science skills for use in research. Using the OpenScienceKE framework—Sensitize, Train, Hack, Collaborate/Community—the BOSS (Bioinformatics and Open Science Skills) virtual events built awareness and empowered researchers with the skills and tools in open science and bioinformatics. Sensitization was achieved through a symposium, training through a workshop and train-the-trainer program, hack through mini-projects, community through conferences, and continuous meet-ups. In this paper, we discuss how we applied the framework during the BOSS events and highlight lessons learnt in planning and executing the events and their impact on the outcome of each phase. We evaluate the impact of the events through anonymous surveys. We show that sensitizing and empowering researchers with the skills works best when the participants apply the skills to real-world problems: project-based learning. Furthermore, we have demonstrated how to implement virtual events in resource-constrained settings by providing Internet and equipment support to participants, thus improving accessibility and diversity. |
format | Online Article Text |
id | pubmed-10267827 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102678272023-06-15 Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model Karega, Pauline Mwaura, David K. Mwangi, Kennedy W. Wanjiku, Margaret Landi, Michael Kibet, Caleb K. Front Res Metr Anal Research Metrics and Analytics We have applied the sensitize-train-hack-community model to build awareness of and capacity in bioinformatics in Kenya. Open science is the practice of science openly and collaboratively, with tools, techniques, and data freely shared to facilitate reuse and collaboration. Open science is not a mandatory curriculum course in schools, whereas bioinformatics is relatively new in some African regions. Open science tools can significantly enhance bioinformatics, leading to increased reproducibility. However, open science and bioinformatics skills, especially blended, are still lacking among students and researchers in resource-constrained regions. We note the need to be aware of the power of open science among the bioinformatics community and a clear strategy to learn bioinformatics and open science skills for use in research. Using the OpenScienceKE framework—Sensitize, Train, Hack, Collaborate/Community—the BOSS (Bioinformatics and Open Science Skills) virtual events built awareness and empowered researchers with the skills and tools in open science and bioinformatics. Sensitization was achieved through a symposium, training through a workshop and train-the-trainer program, hack through mini-projects, community through conferences, and continuous meet-ups. In this paper, we discuss how we applied the framework during the BOSS events and highlight lessons learnt in planning and executing the events and their impact on the outcome of each phase. We evaluate the impact of the events through anonymous surveys. We show that sensitizing and empowering researchers with the skills works best when the participants apply the skills to real-world problems: project-based learning. Furthermore, we have demonstrated how to implement virtual events in resource-constrained settings by providing Internet and equipment support to participants, thus improving accessibility and diversity. Frontiers Media S.A. 2023-05-30 /pmc/articles/PMC10267827/ /pubmed/37324282 http://dx.doi.org/10.3389/frma.2023.1070390 Text en Copyright © 2023 Karega, Mwaura, Mwangi, Wanjiku, Landi and Kibet. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Research Metrics and Analytics Karega, Pauline Mwaura, David K. Mwangi, Kennedy W. Wanjiku, Margaret Landi, Michael Kibet, Caleb K. Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title | Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title_full | Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title_fullStr | Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title_full_unstemmed | Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title_short | Building awareness and capacity of bioinformatics and open science skills in Kenya: a sensitize, train, hack, and collaborate model |
title_sort | building awareness and capacity of bioinformatics and open science skills in kenya: a sensitize, train, hack, and collaborate model |
topic | Research Metrics and Analytics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267827/ https://www.ncbi.nlm.nih.gov/pubmed/37324282 http://dx.doi.org/10.3389/frma.2023.1070390 |
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