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Identification of the potential ferroptosis key genes in lung cancer with bone metastasis

BACKGROUND: To identify the potential key genes of ferroptosis in the pathogenesis of lung cancer with bone metastasis (LCBM) by bioinformatics analysis to provide new targets for treating LCBM and an indicator for early monitoring. METHODS: We first obtained differentially expressed genes (DEGs) as...

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Autores principales: Zhou, Qin, Xu, Ting, Li, Jiajing, Tan, Jing, Mao, Qixing, Liu, Tengfei, Wang, Lijun, Zhang, Minhao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267905/
https://www.ncbi.nlm.nih.gov/pubmed/37324090
http://dx.doi.org/10.21037/jtd-23-539
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author Zhou, Qin
Xu, Ting
Li, Jiajing
Tan, Jing
Mao, Qixing
Liu, Tengfei
Wang, Lijun
Zhang, Minhao
author_facet Zhou, Qin
Xu, Ting
Li, Jiajing
Tan, Jing
Mao, Qixing
Liu, Tengfei
Wang, Lijun
Zhang, Minhao
author_sort Zhou, Qin
collection PubMed
description BACKGROUND: To identify the potential key genes of ferroptosis in the pathogenesis of lung cancer with bone metastasis (LCBM) by bioinformatics analysis to provide new targets for treating LCBM and an indicator for early monitoring. METHODS: We first obtained differentially expressed genes (DEGs) associated with ferroptosis from the Gene Expression Omnibus (GEO) database. MiRWalk 2.0 was used to predict the key microRNAs (miRNAs) and construct related gene-miRNA interaction networks. The functional enrichment analysis of key miRNAs was performed using the miEAA database. Finally, the clinical data of 105 lung cancer patients were retrospectively analyzed, and logistic regression analysis was conducted to assess the relationship between serum alkaline phosphatase (ALP), neuron-specific enolase (NSE), and bone metastasis in lung cancer patients, and a receiver operating characteristic (ROC) curve was drawn. RESULTS: We identified 15 ferroptosis-related genes that were differentially expressed in lung cancer bone metastasis. GO and KEGG enrichment analyses suggested that these genes may affect the oxidative stress response, hypoxia response, rough endoplasmic reticulum, mitochondrial outer membrane, iron-sulfur cluster binding, virus receptor activity, central carbon metabolism in cancer, the interleukin-17 (IL-17) signaling pathway, and other aspects to participate in the occurrence and development of lung cancer bone metastasis. Among the 105 lung cancer patients included in the study, 39 cases had bone metastasis, and the incidence rate was 37.14%. A high Eastern Cooperative Oncology Group (ECOG) score and serum ALP and NSE overexpression were associated with bone metastasis in patients with lung cancer. By assessing the risk of bone metastasis in patients with lung cancer, we found that the Area Under Curves (AUCs) of serum ALP and NSE alone and combined were >0.70. CONCLUSIONS: The differentially expressed ferroptosis-related genes and predicted miRNA regulatory network in lung cancer bone metastasis and the related functional enrichment analysis provide new targets for the treatment of lung cancer bone metastasis. At the same time, from a serological perspective, it was found that early monitoring of serum ALP and NSE expression in patients with lung cancer could be considered to assess the risk of bone metastasis in the future.
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spelling pubmed-102679052023-06-15 Identification of the potential ferroptosis key genes in lung cancer with bone metastasis Zhou, Qin Xu, Ting Li, Jiajing Tan, Jing Mao, Qixing Liu, Tengfei Wang, Lijun Zhang, Minhao J Thorac Dis Original Article BACKGROUND: To identify the potential key genes of ferroptosis in the pathogenesis of lung cancer with bone metastasis (LCBM) by bioinformatics analysis to provide new targets for treating LCBM and an indicator for early monitoring. METHODS: We first obtained differentially expressed genes (DEGs) associated with ferroptosis from the Gene Expression Omnibus (GEO) database. MiRWalk 2.0 was used to predict the key microRNAs (miRNAs) and construct related gene-miRNA interaction networks. The functional enrichment analysis of key miRNAs was performed using the miEAA database. Finally, the clinical data of 105 lung cancer patients were retrospectively analyzed, and logistic regression analysis was conducted to assess the relationship between serum alkaline phosphatase (ALP), neuron-specific enolase (NSE), and bone metastasis in lung cancer patients, and a receiver operating characteristic (ROC) curve was drawn. RESULTS: We identified 15 ferroptosis-related genes that were differentially expressed in lung cancer bone metastasis. GO and KEGG enrichment analyses suggested that these genes may affect the oxidative stress response, hypoxia response, rough endoplasmic reticulum, mitochondrial outer membrane, iron-sulfur cluster binding, virus receptor activity, central carbon metabolism in cancer, the interleukin-17 (IL-17) signaling pathway, and other aspects to participate in the occurrence and development of lung cancer bone metastasis. Among the 105 lung cancer patients included in the study, 39 cases had bone metastasis, and the incidence rate was 37.14%. A high Eastern Cooperative Oncology Group (ECOG) score and serum ALP and NSE overexpression were associated with bone metastasis in patients with lung cancer. By assessing the risk of bone metastasis in patients with lung cancer, we found that the Area Under Curves (AUCs) of serum ALP and NSE alone and combined were >0.70. CONCLUSIONS: The differentially expressed ferroptosis-related genes and predicted miRNA regulatory network in lung cancer bone metastasis and the related functional enrichment analysis provide new targets for the treatment of lung cancer bone metastasis. At the same time, from a serological perspective, it was found that early monitoring of serum ALP and NSE expression in patients with lung cancer could be considered to assess the risk of bone metastasis in the future. AME Publishing Company 2023-05-29 2023-05-30 /pmc/articles/PMC10267905/ /pubmed/37324090 http://dx.doi.org/10.21037/jtd-23-539 Text en 2023 Journal of Thoracic Disease. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Original Article
Zhou, Qin
Xu, Ting
Li, Jiajing
Tan, Jing
Mao, Qixing
Liu, Tengfei
Wang, Lijun
Zhang, Minhao
Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title_full Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title_fullStr Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title_full_unstemmed Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title_short Identification of the potential ferroptosis key genes in lung cancer with bone metastasis
title_sort identification of the potential ferroptosis key genes in lung cancer with bone metastasis
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267905/
https://www.ncbi.nlm.nih.gov/pubmed/37324090
http://dx.doi.org/10.21037/jtd-23-539
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