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Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution

[Image: see text] The ionic current blockades when poly(dT)(60) or dNTPs passed through SiN nanopores in an aqueous solution containing (NH(4))(2)SO(4) were investigated. The dwell time of poly(dT)(60) in the nanopores in an aqueous solution containing (NH(4))(2)SO(4) was significantly longer compar...

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Autores principales: Yanagi, Itaru, Akahori, Rena, Takeda, Ken-ichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10268630/
https://www.ncbi.nlm.nih.gov/pubmed/37332803
http://dx.doi.org/10.1021/acsomega.3c02703
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author Yanagi, Itaru
Akahori, Rena
Takeda, Ken-ichi
author_facet Yanagi, Itaru
Akahori, Rena
Takeda, Ken-ichi
author_sort Yanagi, Itaru
collection PubMed
description [Image: see text] The ionic current blockades when poly(dT)(60) or dNTPs passed through SiN nanopores in an aqueous solution containing (NH(4))(2)SO(4) were investigated. The dwell time of poly(dT)(60) in the nanopores in an aqueous solution containing (NH(4))(2)SO(4) was significantly longer compared to that in an aqueous solution that did not contain (NH(4))(2)SO(4). This dwell time prolongation effect due to the aqueous solution containing (NH(4))(2)SO(4) was also confirmed when dCTP passed through the nanopores. In addition, when the nanopores were fabricated via dielectric breakdown in the aqueous solution containing (NH(4))(2)SO(4), the dwell time prolongation effect for dCTP still occurred even after the aqueous solution was displaced with the aqueous solution without (NH(4))(2)SO(4). Furthermore, we measured the ionic current blockades when the four types of dNTPs passed through the same nanopore, and the four types of dNTPs could be statistically identified according to their current blockade values.
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spelling pubmed-102686302023-06-16 Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution Yanagi, Itaru Akahori, Rena Takeda, Ken-ichi ACS Omega [Image: see text] The ionic current blockades when poly(dT)(60) or dNTPs passed through SiN nanopores in an aqueous solution containing (NH(4))(2)SO(4) were investigated. The dwell time of poly(dT)(60) in the nanopores in an aqueous solution containing (NH(4))(2)SO(4) was significantly longer compared to that in an aqueous solution that did not contain (NH(4))(2)SO(4). This dwell time prolongation effect due to the aqueous solution containing (NH(4))(2)SO(4) was also confirmed when dCTP passed through the nanopores. In addition, when the nanopores were fabricated via dielectric breakdown in the aqueous solution containing (NH(4))(2)SO(4), the dwell time prolongation effect for dCTP still occurred even after the aqueous solution was displaced with the aqueous solution without (NH(4))(2)SO(4). Furthermore, we measured the ionic current blockades when the four types of dNTPs passed through the same nanopore, and the four types of dNTPs could be statistically identified according to their current blockade values. American Chemical Society 2023-06-01 /pmc/articles/PMC10268630/ /pubmed/37332803 http://dx.doi.org/10.1021/acsomega.3c02703 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Yanagi, Itaru
Akahori, Rena
Takeda, Ken-ichi
Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title_full Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title_fullStr Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title_full_unstemmed Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title_short Dwell Time Prolongation and Identification of Single Nucleotides Passing through a Solid-State Nanopore by Using Ammonium Sulfate Aqueous Solution
title_sort dwell time prolongation and identification of single nucleotides passing through a solid-state nanopore by using ammonium sulfate aqueous solution
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10268630/
https://www.ncbi.nlm.nih.gov/pubmed/37332803
http://dx.doi.org/10.1021/acsomega.3c02703
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