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The pGinger Family of Expression Plasmids

The pGinger suite of expression plasmids comprises 43 plasmids that will enable precise constitutive and inducible gene expression in a wide range of Gram-negative bacterial species. Constitutive vectors are composed of 16 synthetic constitutive promoters upstream of red fluorescent protein (RFP), w...

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Autores principales: Pearson, Allison N., Thompson, Mitchell G., Kirkpatrick, Liam D., Ho, Cindy, Vuu, Khanh M., Waldburger, Lucas M., Keasling, Jay D., Shih, Patrick M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10269703/
https://www.ncbi.nlm.nih.gov/pubmed/37212656
http://dx.doi.org/10.1128/spectrum.00373-23
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author Pearson, Allison N.
Thompson, Mitchell G.
Kirkpatrick, Liam D.
Ho, Cindy
Vuu, Khanh M.
Waldburger, Lucas M.
Keasling, Jay D.
Shih, Patrick M.
author_facet Pearson, Allison N.
Thompson, Mitchell G.
Kirkpatrick, Liam D.
Ho, Cindy
Vuu, Khanh M.
Waldburger, Lucas M.
Keasling, Jay D.
Shih, Patrick M.
author_sort Pearson, Allison N.
collection PubMed
description The pGinger suite of expression plasmids comprises 43 plasmids that will enable precise constitutive and inducible gene expression in a wide range of Gram-negative bacterial species. Constitutive vectors are composed of 16 synthetic constitutive promoters upstream of red fluorescent protein (RFP), with a broad-host-range BBR1 origin and a kanamycin resistance marker. The family also has seven inducible systems (Jungle Express, Psal/NahR, Pm/XylS, Prha/RhaS, LacO1/LacI, LacUV5/LacI, and Ptet/TetR) controlling RFP expression on BBR1/kanamycin plasmid backbones. For four of these inducible systems (Jungle Express, Psal/NahR, LacO1/LacI, and Ptet/TetR), we created variants that utilize the RK2 origin and spectinomycin or gentamicin selection. Relevant RFP expression and growth data have been collected in the model bacterium Escherichia coli as well as Pseudomonas putida. All pGinger vectors are available via the Joint BioEnergy Institute (JBEI) Public Registry. IMPORTANCE Metabolic engineering and synthetic biology are predicated on the precise control of gene expression. As synthetic biology expands beyond model organisms, more tools will be required that function robustly in a wide range of bacterial hosts. The pGinger family of plasmids constitutes 43 plasmids that will enable both constitutive and inducible gene expression in a wide range of nonmodel Proteobacteria.
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spelling pubmed-102697032023-06-16 The pGinger Family of Expression Plasmids Pearson, Allison N. Thompson, Mitchell G. Kirkpatrick, Liam D. Ho, Cindy Vuu, Khanh M. Waldburger, Lucas M. Keasling, Jay D. Shih, Patrick M. Microbiol Spectr Resource Report The pGinger suite of expression plasmids comprises 43 plasmids that will enable precise constitutive and inducible gene expression in a wide range of Gram-negative bacterial species. Constitutive vectors are composed of 16 synthetic constitutive promoters upstream of red fluorescent protein (RFP), with a broad-host-range BBR1 origin and a kanamycin resistance marker. The family also has seven inducible systems (Jungle Express, Psal/NahR, Pm/XylS, Prha/RhaS, LacO1/LacI, LacUV5/LacI, and Ptet/TetR) controlling RFP expression on BBR1/kanamycin plasmid backbones. For four of these inducible systems (Jungle Express, Psal/NahR, LacO1/LacI, and Ptet/TetR), we created variants that utilize the RK2 origin and spectinomycin or gentamicin selection. Relevant RFP expression and growth data have been collected in the model bacterium Escherichia coli as well as Pseudomonas putida. All pGinger vectors are available via the Joint BioEnergy Institute (JBEI) Public Registry. IMPORTANCE Metabolic engineering and synthetic biology are predicated on the precise control of gene expression. As synthetic biology expands beyond model organisms, more tools will be required that function robustly in a wide range of bacterial hosts. The pGinger family of plasmids constitutes 43 plasmids that will enable both constitutive and inducible gene expression in a wide range of nonmodel Proteobacteria. American Society for Microbiology 2023-05-22 /pmc/articles/PMC10269703/ /pubmed/37212656 http://dx.doi.org/10.1128/spectrum.00373-23 Text en Copyright © 2023 Pearson et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Resource Report
Pearson, Allison N.
Thompson, Mitchell G.
Kirkpatrick, Liam D.
Ho, Cindy
Vuu, Khanh M.
Waldburger, Lucas M.
Keasling, Jay D.
Shih, Patrick M.
The pGinger Family of Expression Plasmids
title The pGinger Family of Expression Plasmids
title_full The pGinger Family of Expression Plasmids
title_fullStr The pGinger Family of Expression Plasmids
title_full_unstemmed The pGinger Family of Expression Plasmids
title_short The pGinger Family of Expression Plasmids
title_sort pginger family of expression plasmids
topic Resource Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10269703/
https://www.ncbi.nlm.nih.gov/pubmed/37212656
http://dx.doi.org/10.1128/spectrum.00373-23
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