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Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules
Biocatalysis is a key technology enabling plastic recycling. However, despite advances done in the development of plastic-degrading enzymes, the molecular mechanisms that govern their catalytic performance are poorly understood, hampering the engineering of more efficient enzyme-based technologies....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272158/ https://www.ncbi.nlm.nih.gov/pubmed/37321996 http://dx.doi.org/10.1038/s41467-023-39201-1 |
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author | Świderek, Katarzyna Velasco-Lozano, Susana Galmés, Miquel À. Olazabal, Ion Sardon, Haritz López-Gallego, Fernando Moliner, Vicent |
author_facet | Świderek, Katarzyna Velasco-Lozano, Susana Galmés, Miquel À. Olazabal, Ion Sardon, Haritz López-Gallego, Fernando Moliner, Vicent |
author_sort | Świderek, Katarzyna |
collection | PubMed |
description | Biocatalysis is a key technology enabling plastic recycling. However, despite advances done in the development of plastic-degrading enzymes, the molecular mechanisms that govern their catalytic performance are poorly understood, hampering the engineering of more efficient enzyme-based technologies. In this work, we study the hydrolysis of PET-derived diesters and PET trimers catalyzed by the highly promiscuous lipase B from Candida antarctica (CALB) through QM/MM molecular dynamics simulations supported by experimental Michaelis–Menten kinetics. The computational studies reveal the role of the pH on the CALB regioselectivity toward the hydrolysis of bis-(hydroxyethyl) terephthalate (BHET). We exploit this insight to perform a pH-controlled biotransformation that selectively hydrolyzes BHET to either its corresponding diacid or monoesters using both soluble and immobilized CALB. The discoveries presented here can be exploited for the valorization of BHET resulting from the organocatalytic depolymerization of PET. |
format | Online Article Text |
id | pubmed-10272158 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-102721582023-06-17 Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules Świderek, Katarzyna Velasco-Lozano, Susana Galmés, Miquel À. Olazabal, Ion Sardon, Haritz López-Gallego, Fernando Moliner, Vicent Nat Commun Article Biocatalysis is a key technology enabling plastic recycling. However, despite advances done in the development of plastic-degrading enzymes, the molecular mechanisms that govern their catalytic performance are poorly understood, hampering the engineering of more efficient enzyme-based technologies. In this work, we study the hydrolysis of PET-derived diesters and PET trimers catalyzed by the highly promiscuous lipase B from Candida antarctica (CALB) through QM/MM molecular dynamics simulations supported by experimental Michaelis–Menten kinetics. The computational studies reveal the role of the pH on the CALB regioselectivity toward the hydrolysis of bis-(hydroxyethyl) terephthalate (BHET). We exploit this insight to perform a pH-controlled biotransformation that selectively hydrolyzes BHET to either its corresponding diacid or monoesters using both soluble and immobilized CALB. The discoveries presented here can be exploited for the valorization of BHET resulting from the organocatalytic depolymerization of PET. Nature Publishing Group UK 2023-06-15 /pmc/articles/PMC10272158/ /pubmed/37321996 http://dx.doi.org/10.1038/s41467-023-39201-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Świderek, Katarzyna Velasco-Lozano, Susana Galmés, Miquel À. Olazabal, Ion Sardon, Haritz López-Gallego, Fernando Moliner, Vicent Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title | Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title_full | Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title_fullStr | Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title_full_unstemmed | Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title_short | Mechanistic studies of a lipase unveil effect of pH on hydrolysis products of small PET modules |
title_sort | mechanistic studies of a lipase unveil effect of ph on hydrolysis products of small pet modules |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272158/ https://www.ncbi.nlm.nih.gov/pubmed/37321996 http://dx.doi.org/10.1038/s41467-023-39201-1 |
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