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A computational approach to design a polyvalent vaccine against human respiratory syncytial virus

Human Respiratory Syncytial Virus (RSV) is one of the leading causes of lower respiratory tract infections (LRTI), responsible for infecting people from all age groups—a majority of which comprises infants and children. Primarily, severe RSV infections are accountable for multitudes of deaths worldw...

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Autores principales: Moin, Abu Tayab, Ullah, Md. Asad, Patil, Rajesh B., Faruqui, Nairita Ahsan, Araf, Yusha, Das, Sowmen, Uddin, Khaza Md. Kapil, Hossain, Md. Shakhawat, Miah, Md. Faruque, Moni, Mohammad Ali, Chowdhury, Dil Umme Salma, Islam, Saiful
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272159/
https://www.ncbi.nlm.nih.gov/pubmed/37322049
http://dx.doi.org/10.1038/s41598-023-35309-y
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author Moin, Abu Tayab
Ullah, Md. Asad
Patil, Rajesh B.
Faruqui, Nairita Ahsan
Araf, Yusha
Das, Sowmen
Uddin, Khaza Md. Kapil
Hossain, Md. Shakhawat
Miah, Md. Faruque
Moni, Mohammad Ali
Chowdhury, Dil Umme Salma
Islam, Saiful
author_facet Moin, Abu Tayab
Ullah, Md. Asad
Patil, Rajesh B.
Faruqui, Nairita Ahsan
Araf, Yusha
Das, Sowmen
Uddin, Khaza Md. Kapil
Hossain, Md. Shakhawat
Miah, Md. Faruque
Moni, Mohammad Ali
Chowdhury, Dil Umme Salma
Islam, Saiful
author_sort Moin, Abu Tayab
collection PubMed
description Human Respiratory Syncytial Virus (RSV) is one of the leading causes of lower respiratory tract infections (LRTI), responsible for infecting people from all age groups—a majority of which comprises infants and children. Primarily, severe RSV infections are accountable for multitudes of deaths worldwide, predominantly of children, every year. Despite several efforts to develop a vaccine against RSV as a potential countermeasure, there has been no approved or licensed vaccine available yet, to control the RSV infection effectively. Therefore, through the utilization of immunoinformatics tools, a computational approach was taken in this study, to design a multi-epitope polyvalent vaccine against two major antigenic subtypes of RSV, RSV-A and RSV-B. Potential predictions of the T-cell and B-cell epitopes were followed by extensive tests of antigenicity, allergenicity, toxicity, conservancy, homology to human proteome, transmembrane topology, and cytokine-inducing ability. The peptide vaccine was modeled, refined, and validated. Molecular docking analysis with specific Toll-like receptors (TLRs) revealed excellent interactions with suitable global binding energies. Additionally, molecular dynamics (MD) simulation ensured the stability of the docking interactions between the vaccine and TLRs. Mechanistic approaches to imitate and predict the potential immune response generated by the administration of vaccines were determined through immune simulations. Subsequent mass production of the vaccine peptide was evaluated; however, there remains a necessity for further in vitro and in vivo experiments to validate its efficacy against RSV infections.
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spelling pubmed-102721592023-06-17 A computational approach to design a polyvalent vaccine against human respiratory syncytial virus Moin, Abu Tayab Ullah, Md. Asad Patil, Rajesh B. Faruqui, Nairita Ahsan Araf, Yusha Das, Sowmen Uddin, Khaza Md. Kapil Hossain, Md. Shakhawat Miah, Md. Faruque Moni, Mohammad Ali Chowdhury, Dil Umme Salma Islam, Saiful Sci Rep Article Human Respiratory Syncytial Virus (RSV) is one of the leading causes of lower respiratory tract infections (LRTI), responsible for infecting people from all age groups—a majority of which comprises infants and children. Primarily, severe RSV infections are accountable for multitudes of deaths worldwide, predominantly of children, every year. Despite several efforts to develop a vaccine against RSV as a potential countermeasure, there has been no approved or licensed vaccine available yet, to control the RSV infection effectively. Therefore, through the utilization of immunoinformatics tools, a computational approach was taken in this study, to design a multi-epitope polyvalent vaccine against two major antigenic subtypes of RSV, RSV-A and RSV-B. Potential predictions of the T-cell and B-cell epitopes were followed by extensive tests of antigenicity, allergenicity, toxicity, conservancy, homology to human proteome, transmembrane topology, and cytokine-inducing ability. The peptide vaccine was modeled, refined, and validated. Molecular docking analysis with specific Toll-like receptors (TLRs) revealed excellent interactions with suitable global binding energies. Additionally, molecular dynamics (MD) simulation ensured the stability of the docking interactions between the vaccine and TLRs. Mechanistic approaches to imitate and predict the potential immune response generated by the administration of vaccines were determined through immune simulations. Subsequent mass production of the vaccine peptide was evaluated; however, there remains a necessity for further in vitro and in vivo experiments to validate its efficacy against RSV infections. Nature Publishing Group UK 2023-06-15 /pmc/articles/PMC10272159/ /pubmed/37322049 http://dx.doi.org/10.1038/s41598-023-35309-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Moin, Abu Tayab
Ullah, Md. Asad
Patil, Rajesh B.
Faruqui, Nairita Ahsan
Araf, Yusha
Das, Sowmen
Uddin, Khaza Md. Kapil
Hossain, Md. Shakhawat
Miah, Md. Faruque
Moni, Mohammad Ali
Chowdhury, Dil Umme Salma
Islam, Saiful
A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title_full A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title_fullStr A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title_full_unstemmed A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title_short A computational approach to design a polyvalent vaccine against human respiratory syncytial virus
title_sort computational approach to design a polyvalent vaccine against human respiratory syncytial virus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272159/
https://www.ncbi.nlm.nih.gov/pubmed/37322049
http://dx.doi.org/10.1038/s41598-023-35309-y
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