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GABNet: global attention block for retinal OCT disease classification
INTRODUCTION: The retina represents a critical ocular structure. Of the various ophthalmic afflictions, retinal pathologies have garnered considerable scientific interest, owing to their elevated prevalence and propensity to induce blindness. Among clinical evaluation techniques employed in ophthalm...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272427/ https://www.ncbi.nlm.nih.gov/pubmed/37332865 http://dx.doi.org/10.3389/fnins.2023.1143422 |
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author | Huang, Xuan Ai, Zhuang Wang, Hui She, Chongyang Feng, Jing Wei, Qihao Hao, Baohai Tao, Yong Lu, Yaping Zeng, Fanxin |
author_facet | Huang, Xuan Ai, Zhuang Wang, Hui She, Chongyang Feng, Jing Wei, Qihao Hao, Baohai Tao, Yong Lu, Yaping Zeng, Fanxin |
author_sort | Huang, Xuan |
collection | PubMed |
description | INTRODUCTION: The retina represents a critical ocular structure. Of the various ophthalmic afflictions, retinal pathologies have garnered considerable scientific interest, owing to their elevated prevalence and propensity to induce blindness. Among clinical evaluation techniques employed in ophthalmology, optical coherence tomography (OCT) is the most commonly utilized, as it permits non-invasive, rapid acquisition of high-resolution, cross-sectional images of the retina. Timely detection and intervention can significantly abate the risk of blindness and effectively mitigate the national incidence rate of visual impairments. METHODS: This study introduces a novel, efficient global attention block (GAB) for feed forward convolutional neural networks (CNNs). The GAB generates an attention map along three dimensions (height, width, and channel) for any intermediate feature map, which it then uses to compute adaptive feature weights by multiplying it with the input feature map. This GAB is a versatile module that can seamlessly integrate with any CNN, significantly improving its classification performance. Based on the GAB, we propose a lightweight classification network model, GABNet, which we develop on a UCSD general retinal OCT dataset comprising 108,312 OCT images from 4686 patients, including choroidal neovascularization (CNV), diabetic macular edema (DME), drusen, and normal cases. RESULTS: Notably, our approach improves the classification accuracy by 3.7% over the EfficientNetV2B3 network model. We further employ gradient-weighted class activation mapping (Grad-CAM) to highlight regions of interest on retinal OCT images for each class, enabling doctors to easily interpret model predictions and improve their efficiency in evaluating relevant models. DISCUSSION: With the increasing use and application of OCT technology in the clinical diagnosis of retinal images, our approach offers an additional diagnostic tool to enhance the diagnostic efficiency of clinical OCT retinal images. |
format | Online Article Text |
id | pubmed-10272427 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102724272023-06-17 GABNet: global attention block for retinal OCT disease classification Huang, Xuan Ai, Zhuang Wang, Hui She, Chongyang Feng, Jing Wei, Qihao Hao, Baohai Tao, Yong Lu, Yaping Zeng, Fanxin Front Neurosci Neuroscience INTRODUCTION: The retina represents a critical ocular structure. Of the various ophthalmic afflictions, retinal pathologies have garnered considerable scientific interest, owing to their elevated prevalence and propensity to induce blindness. Among clinical evaluation techniques employed in ophthalmology, optical coherence tomography (OCT) is the most commonly utilized, as it permits non-invasive, rapid acquisition of high-resolution, cross-sectional images of the retina. Timely detection and intervention can significantly abate the risk of blindness and effectively mitigate the national incidence rate of visual impairments. METHODS: This study introduces a novel, efficient global attention block (GAB) for feed forward convolutional neural networks (CNNs). The GAB generates an attention map along three dimensions (height, width, and channel) for any intermediate feature map, which it then uses to compute adaptive feature weights by multiplying it with the input feature map. This GAB is a versatile module that can seamlessly integrate with any CNN, significantly improving its classification performance. Based on the GAB, we propose a lightweight classification network model, GABNet, which we develop on a UCSD general retinal OCT dataset comprising 108,312 OCT images from 4686 patients, including choroidal neovascularization (CNV), diabetic macular edema (DME), drusen, and normal cases. RESULTS: Notably, our approach improves the classification accuracy by 3.7% over the EfficientNetV2B3 network model. We further employ gradient-weighted class activation mapping (Grad-CAM) to highlight regions of interest on retinal OCT images for each class, enabling doctors to easily interpret model predictions and improve their efficiency in evaluating relevant models. DISCUSSION: With the increasing use and application of OCT technology in the clinical diagnosis of retinal images, our approach offers an additional diagnostic tool to enhance the diagnostic efficiency of clinical OCT retinal images. Frontiers Media S.A. 2023-06-02 /pmc/articles/PMC10272427/ /pubmed/37332865 http://dx.doi.org/10.3389/fnins.2023.1143422 Text en Copyright © 2023 Huang, Ai, Wang, She, Feng, Wei, Hao, Tao, Lu and Zeng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Huang, Xuan Ai, Zhuang Wang, Hui She, Chongyang Feng, Jing Wei, Qihao Hao, Baohai Tao, Yong Lu, Yaping Zeng, Fanxin GABNet: global attention block for retinal OCT disease classification |
title | GABNet: global attention block for retinal OCT disease classification |
title_full | GABNet: global attention block for retinal OCT disease classification |
title_fullStr | GABNet: global attention block for retinal OCT disease classification |
title_full_unstemmed | GABNet: global attention block for retinal OCT disease classification |
title_short | GABNet: global attention block for retinal OCT disease classification |
title_sort | gabnet: global attention block for retinal oct disease classification |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272427/ https://www.ncbi.nlm.nih.gov/pubmed/37332865 http://dx.doi.org/10.3389/fnins.2023.1143422 |
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