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Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet
Sugar beet is one of the most important sugar crops in the world. It contributes greatly to the global sugar production, but salt stress negatively affects the crop yield. WD40 proteins play important roles in plant growth and response to abiotic stresses through their involvement in a variety of bi...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272600/ https://www.ncbi.nlm.nih.gov/pubmed/37332716 http://dx.doi.org/10.3389/fpls.2023.1185440 |
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author | Wu, Zhirui Zhang, Tingyue Li, Jinna Chen, Sixue Grin, Inga R. Zharkov, Dmitry O. Yu, Bing Li, Haiying |
author_facet | Wu, Zhirui Zhang, Tingyue Li, Jinna Chen, Sixue Grin, Inga R. Zharkov, Dmitry O. Yu, Bing Li, Haiying |
author_sort | Wu, Zhirui |
collection | PubMed |
description | Sugar beet is one of the most important sugar crops in the world. It contributes greatly to the global sugar production, but salt stress negatively affects the crop yield. WD40 proteins play important roles in plant growth and response to abiotic stresses through their involvement in a variety of biological processes, such as signal transduction, histone modification, ubiquitination, and RNA processing. The WD40 protein family has been well-studied in Arabidopsis thaliana, rice and other plants, but the systematic analysis of the sugar beet WD40 proteins has not been reported. In this study, a total of 177 BvWD40 proteins were identified from the sugar beet genome, and their evolutionary characteristics, protein structure, gene structure, protein interaction network and gene ontology were systematically analyzed to understand their evolution and function. Meanwhile, the expression patterns of BvWD40s under salt stress were characterized, and a BvWD40-82 gene was hypothesized as a salt-tolerant candidate gene. Its function was further characterized using molecular and genetic methods. The result showed that BvWD40-82 enhanced salt stress tolerance in transgenic Arabidopsis seedlings by increasing the contents of osmolytes and antioxidant enzyme activities, maintaining intracellular ion homeostasis and increasing the expression of genes related to SOS and ABA pathways. The result has laid a foundation for further mechanistic study of the BvWD40 genes in sugar beet tolerance to salt stress, and it may inform biotechnological applications in improving crop stress resilience. |
format | Online Article Text |
id | pubmed-10272600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-102726002023-06-17 Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet Wu, Zhirui Zhang, Tingyue Li, Jinna Chen, Sixue Grin, Inga R. Zharkov, Dmitry O. Yu, Bing Li, Haiying Front Plant Sci Plant Science Sugar beet is one of the most important sugar crops in the world. It contributes greatly to the global sugar production, but salt stress negatively affects the crop yield. WD40 proteins play important roles in plant growth and response to abiotic stresses through their involvement in a variety of biological processes, such as signal transduction, histone modification, ubiquitination, and RNA processing. The WD40 protein family has been well-studied in Arabidopsis thaliana, rice and other plants, but the systematic analysis of the sugar beet WD40 proteins has not been reported. In this study, a total of 177 BvWD40 proteins were identified from the sugar beet genome, and their evolutionary characteristics, protein structure, gene structure, protein interaction network and gene ontology were systematically analyzed to understand their evolution and function. Meanwhile, the expression patterns of BvWD40s under salt stress were characterized, and a BvWD40-82 gene was hypothesized as a salt-tolerant candidate gene. Its function was further characterized using molecular and genetic methods. The result showed that BvWD40-82 enhanced salt stress tolerance in transgenic Arabidopsis seedlings by increasing the contents of osmolytes and antioxidant enzyme activities, maintaining intracellular ion homeostasis and increasing the expression of genes related to SOS and ABA pathways. The result has laid a foundation for further mechanistic study of the BvWD40 genes in sugar beet tolerance to salt stress, and it may inform biotechnological applications in improving crop stress resilience. Frontiers Media S.A. 2023-06-02 /pmc/articles/PMC10272600/ /pubmed/37332716 http://dx.doi.org/10.3389/fpls.2023.1185440 Text en Copyright © 2023 Wu, Zhang, Li, Chen, Grin, Zharkov, Yu and Li https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Wu, Zhirui Zhang, Tingyue Li, Jinna Chen, Sixue Grin, Inga R. Zharkov, Dmitry O. Yu, Bing Li, Haiying Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title | Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title_full | Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title_fullStr | Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title_full_unstemmed | Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title_short | Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet |
title_sort | genome-wide analysis of wd40 protein family and functional characterization of bvwd40-82 in sugar beet |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10272600/ https://www.ncbi.nlm.nih.gov/pubmed/37332716 http://dx.doi.org/10.3389/fpls.2023.1185440 |
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